Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A12P48065 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.51■□□□□ 0.23
SLC6A12P48065 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A12P48065 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A12P48065 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A12P48065 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC6A12P48065 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SLC6A12P48065 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.51■□□□□ 0.23
SLC6A12P48065 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC6A12P48065 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
SLC6A12P48065 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A12P48065 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A12P48065 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC6A12P48065 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC6A12P48065 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A12P48065 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC6A12P48065 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SLC6A12P48065 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A12P48065 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A12P48065 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SLC6A12P48065 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A12P48065 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A12P48065 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A12P48065 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A12P48065 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC6A12P48065 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC6A12P48065 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
SLC6A12P48065 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SLC6A12P48065 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SLC6A12P48065 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A12P48065 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SLC6A12P48065 PTCHD3P3-201ENST00000403073 906 ntBASIC16.5■□□□□ 0.23
SLC6A12P48065 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A12P48065 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC6A12P48065 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SLC6A12P48065 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
SLC6A12P48065 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A12P48065 AC006557.2-201ENST00000592985 1240 ntBASIC16.5■□□□□ 0.23
SLC6A12P48065 AL121912.1-201ENST00000603683 238 ntBASIC16.5■□□□□ 0.23
SLC6A12P48065 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
SLC6A12P48065 AL805961.1-202ENST00000641562 540 ntBASIC16.5■□□□□ 0.23
SLC6A12P48065 KRT8P49-201ENST00000604166 1432 ntBASIC16.5■□□□□ 0.23
SLC6A12P48065 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A12P48065 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A12P48065 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A12P48065 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A12P48065 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A12P48065 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A12P48065 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A12P48065 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SLC6A12P48065 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SLC6A12P48065 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A12P48065 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A12P48065 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A12P48065 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
SLC6A12P48065 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A12P48065 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A12P48065 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SLC6A12P48065 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC6A12P48065 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC6A12P48065 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A12P48065 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A12P48065 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A12P48065 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
SLC6A12P48065 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A12P48065 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC6A12P48065 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A12P48065 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A12P48065 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A12P48065 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SLC6A12P48065 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC6A12P48065 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A12P48065 RPS2P1-201ENST00000434010 821 ntBASIC16.49■□□□□ 0.23
SLC6A12P48065 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC6A12P48065 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC6A12P48065 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SLC6A12P48065 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.49■□□□□ 0.23
SLC6A12P48065 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A12P48065 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.49■□□□□ 0.23
SLC6A12P48065 AL691432.3-201ENST00000621860 400 ntBASIC16.49■□□□□ 0.23
SLC6A12P48065 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SLC6A12P48065 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A12P48065 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC6A12P48065 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A12P48065 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SLC6A12P48065 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A12P48065 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC6A12P48065 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC6A12P48065 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A12P48065 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A12P48065 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SLC6A12P48065 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A12P48065 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC6A12P48065 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A12P48065 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A12P48065 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A12P48065 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A12P48065 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC6A12P48065 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC6A12P48065 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms