Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR1P43307 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSR1P43307 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.28■□□□□ 0.52
SSR1P43307 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSR1P43307 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR1P43307 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR1P43307 NKILA-202ENST00000614771 2598 ntBASIC18.28■□□□□ 0.52
SSR1P43307 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR1P43307 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
SSR1P43307 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR1P43307 AC103564.2-201ENST00000432853 1299 ntBASIC18.28■□□□□ 0.52
SSR1P43307 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.28■□□□□ 0.52
SSR1P43307 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.28■□□□□ 0.52
SSR1P43307 AC122714.2-201ENST00000502787 707 ntBASIC18.28■□□□□ 0.52
SSR1P43307 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.28■□□□□ 0.52
SSR1P43307 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSR1P43307 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR1P43307 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.28■□□□□ 0.52
SSR1P43307 AL353801.3-201ENST00000609898 542 ntBASIC18.28■□□□□ 0.52
SSR1P43307 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSR1P43307 KRT8P10-201ENST00000450021 1447 ntBASIC18.28■□□□□ 0.52
SSR1P43307 AC011676.5-201ENST00000624864 2660 ntBASIC18.28■□□□□ 0.52
SSR1P43307 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
SSR1P43307 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SSR1P43307 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR1P43307 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR1P43307 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR1P43307 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR1P43307 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR1P43307 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.28■□□□□ 0.52
SSR1P43307 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.28■□□□□ 0.52
SSR1P43307 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR1P43307 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR1P43307 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.27■□□□□ 0.52
SSR1P43307 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SSR1P43307 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSR1P43307 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSR1P43307 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.27■□□□□ 0.52
SSR1P43307 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SSR1P43307 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.27■□□□□ 0.52
SSR1P43307 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.27■□□□□ 0.52
SSR1P43307 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SSR1P43307 AC060834.1-201ENST00000443027 2032 ntBASIC18.27■□□□□ 0.52
SSR1P43307 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SSR1P43307 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSR1P43307 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.27■□□□□ 0.52
SSR1P43307 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSR1P43307 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SSR1P43307 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSR1P43307 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SSR1P43307 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSR1P43307 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.27■□□□□ 0.52
SSR1P43307 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.27■□□□□ 0.52
SSR1P43307 AC246785.2-201ENST00000432512 513 ntBASIC18.27■□□□□ 0.52
SSR1P43307 LINC00265-3P-201ENST00000447588 903 ntBASIC18.27■□□□□ 0.52
SSR1P43307 AC009533.2-201ENST00000543664 586 ntBASIC18.27■□□□□ 0.52
SSR1P43307 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
SSR1P43307 AC116407.4-201ENST00000623319 1061 ntBASIC18.27■□□□□ 0.52
SSR1P43307 AC079328.2-201ENST00000561241 3354 ntBASIC18.27■□□□□ 0.52
SSR1P43307 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SSR1P43307 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSR1P43307 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSR1P43307 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.27■□□□□ 0.52
SSR1P43307 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSR1P43307 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSR1P43307 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSR1P43307 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SSR1P43307 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SSR1P43307 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SSR1P43307 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SSR1P43307 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SSR1P43307 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SSR1P43307 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SSR1P43307 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSR1P43307 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSR1P43307 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.26■□□□□ 0.51
SSR1P43307 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSR1P43307 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSR1P43307 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSR1P43307 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSR1P43307 AC084018.2-201ENST00000613093 2607 ntBASIC18.26■□□□□ 0.51
SSR1P43307 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.26■□□□□ 0.51
SSR1P43307 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSR1P43307 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSR1P43307 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.26■□□□□ 0.51
SSR1P43307 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSR1P43307 AC116353.5-201ENST00000638148 1699 ntBASIC18.26■□□□□ 0.51
SSR1P43307 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSR1P43307 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSR1P43307 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSR1P43307 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.26■□□□□ 0.51
SSR1P43307 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.26■□□□□ 0.51
SSR1P43307 TOB2P1-201ENST00000469761 992 ntBASIC18.26■□□□□ 0.51
SSR1P43307 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.26■□□□□ 0.51
SSR1P43307 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.26■□□□□ 0.51
SSR1P43307 AP005901.3-202ENST00000581653 237 ntBASIC18.26■□□□□ 0.51
SSR1P43307 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.26■□□□□ 0.51
SSR1P43307 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
SSR1P43307 AP002414.4-201ENST00000589764 1148 ntBASIC18.26■□□□□ 0.51
SSR1P43307 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms