Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
COPB2P35606 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
COPB2P35606 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COPB2P35606 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COPB2P35606 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
COPB2P35606 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
COPB2P35606 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.52■□□□□ 0.72
COPB2P35606 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.52■□□□□ 0.72
COPB2P35606 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COPB2P35606 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COPB2P35606 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COPB2P35606 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.52■□□□□ 0.72
COPB2P35606 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COPB2P35606 AC067863.1-201ENST00000494933 530 ntBASIC19.52■□□□□ 0.72
COPB2P35606 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.52■□□□□ 0.72
COPB2P35606 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.52■□□□□ 0.72
COPB2P35606 AC092364.2-202ENST00000597012 1073 ntBASIC19.52■□□□□ 0.72
COPB2P35606 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COPB2P35606 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
COPB2P35606 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
COPB2P35606 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.52■□□□□ 0.72
COPB2P35606 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.52■□□□□ 0.72
COPB2P35606 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.52■□□□□ 0.72
COPB2P35606 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COPB2P35606 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COPB2P35606 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COPB2P35606 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.52■□□□□ 0.71
COPB2P35606 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
COPB2P35606 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COPB2P35606 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.51■□□□□ 0.71
COPB2P35606 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COPB2P35606 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
COPB2P35606 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COPB2P35606 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COPB2P35606 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COPB2P35606 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
COPB2P35606 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.51■□□□□ 0.71
COPB2P35606 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.51■□□□□ 0.71
COPB2P35606 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.51■□□□□ 0.71
COPB2P35606 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.51■□□□□ 0.71
COPB2P35606 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.51■□□□□ 0.71
COPB2P35606 RARRES2P8-201ENST00000566335 367 ntBASIC19.51■□□□□ 0.71
COPB2P35606 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.51■□□□□ 0.71
COPB2P35606 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.51■□□□□ 0.71
COPB2P35606 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
COPB2P35606 AC133963.1-201ENST00000504166 1679 ntBASIC19.51■□□□□ 0.71
COPB2P35606 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.51■□□□□ 0.71
COPB2P35606 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COPB2P35606 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COPB2P35606 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COPB2P35606 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
COPB2P35606 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COPB2P35606 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COPB2P35606 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.51■□□□□ 0.71
COPB2P35606 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COPB2P35606 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COPB2P35606 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COPB2P35606 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.51■□□□□ 0.71
COPB2P35606 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COPB2P35606 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPB2P35606 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPB2P35606 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
COPB2P35606 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.5■□□□□ 0.71
COPB2P35606 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPB2P35606 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COPB2P35606 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPB2P35606 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COPB2P35606 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.5■□□□□ 0.71
COPB2P35606 FAM8A3P-201ENST00000427218 844 ntBASIC19.5■□□□□ 0.71
COPB2P35606 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.5■□□□□ 0.71
COPB2P35606 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.5■□□□□ 0.71
COPB2P35606 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.5■□□□□ 0.71
COPB2P35606 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.5■□□□□ 0.71
COPB2P35606 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COPB2P35606 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.5■□□□□ 0.71
COPB2P35606 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.5■□□□□ 0.71
COPB2P35606 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
COPB2P35606 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
COPB2P35606 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COPB2P35606 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.5■□□□□ 0.71
COPB2P35606 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.5■□□□□ 0.71
COPB2P35606 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPB2P35606 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
COPB2P35606 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
COPB2P35606 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.49■□□□□ 0.71
COPB2P35606 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.49■□□□□ 0.71
COPB2P35606 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.49■□□□□ 0.71
COPB2P35606 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COPB2P35606 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
COPB2P35606 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COPB2P35606 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
COPB2P35606 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COPB2P35606 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COPB2P35606 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
COPB2P35606 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COPB2P35606 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.49■□□□□ 0.71
COPB2P35606 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COPB2P35606 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.49■□□□□ 0.71
COPB2P35606 TFAMP1-201ENST00000412727 736 ntBASIC19.49■□□□□ 0.71
COPB2P35606 AC005237.2-201ENST00000434368 219 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms