Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC12.67□□□□□ -0.38
CKS2P33552 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CKS2P33552 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CKS2P33552 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.66□□□□□ -0.38
CKS2P33552 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.66□□□□□ -0.38
CKS2P33552 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CKS2P33552 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 KRT8P9-201ENST00000558927 1449 ntBASIC12.66□□□□□ -0.38
CKS2P33552 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CKS2P33552 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 MESTP1-201ENST00000404287 994 ntBASIC12.66□□□□□ -0.38
CKS2P33552 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC12.66□□□□□ -0.38
CKS2P33552 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC12.66□□□□□ -0.38
CKS2P33552 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC12.66□□□□□ -0.38
CKS2P33552 RPS15-203ENST00000586096 570 ntTSL 2 BASIC12.66□□□□□ -0.38
CKS2P33552 GAMT-205ENST00000640762 751 ntTSL 5 BASIC12.66□□□□□ -0.38
CKS2P33552 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.66□□□□□ -0.38
CKS2P33552 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CKS2P33552 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CKS2P33552 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC12.66□□□□□ -0.38
CKS2P33552 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
CKS2P33552 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CKS2P33552 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CKS2P33552 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CKS2P33552 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
CKS2P33552 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.65□□□□□ -0.38
CKS2P33552 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CKS2P33552 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CKS2P33552 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC12.65□□□□□ -0.38
CKS2P33552 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 KRT18P29-201ENST00000397031 1267 ntBASIC12.65□□□□□ -0.38
CKS2P33552 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CKS2P33552 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
CKS2P33552 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC12.65□□□□□ -0.38
CKS2P33552 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.65□□□□□ -0.38
CKS2P33552 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC12.65□□□□□ -0.38
CKS2P33552 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CKS2P33552 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
CKS2P33552 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC12.65□□□□□ -0.38
CKS2P33552 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC12.65□□□□□ -0.38
CKS2P33552 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC12.65□□□□□ -0.38
CKS2P33552 AC092364.2-201ENST00000596710 2692 ntBASIC12.65□□□□□ -0.38
CKS2P33552 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms