Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 MCCD1P2-201ENST00000423228 335 ntBASIC17.53■□□□□ 0.4
SLC6A4P31645 GPX1P2-201ENST00000429271 606 ntBASIC17.53■□□□□ 0.4
SLC6A4P31645 AC112482.1-201ENST00000492080 688 ntBASIC17.53■□□□□ 0.4
SLC6A4P31645 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
SLC6A4P31645 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.53■□□□□ 0.4
SLC6A4P31645 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC6A4P31645 PDPK2P-202ENST00000562415 1191 ntBASIC17.53■□□□□ 0.4
SLC6A4P31645 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.53■□□□□ 0.4
SLC6A4P31645 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.53■□□□□ 0.4
SLC6A4P31645 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.53■□□□□ 0.4
SLC6A4P31645 AC006538.3-201ENST00000612495 578 ntBASIC17.53■□□□□ 0.4
SLC6A4P31645 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC6A4P31645 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A4P31645 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC6A4P31645 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A4P31645 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A4P31645 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A4P31645 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A4P31645 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC6A4P31645 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A4P31645 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A4P31645 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A4P31645 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC6A4P31645 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A4P31645 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SLC6A4P31645 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A4P31645 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A4P31645 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A4P31645 AC108860.2-201ENST00000562760 2183 ntBASIC17.52■□□□□ 0.4
SLC6A4P31645 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SLC6A4P31645 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A4P31645 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC6A4P31645 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A4P31645 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC6A4P31645 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A4P31645 UPF3AP3-201ENST00000420996 769 ntBASIC17.52■□□□□ 0.4
SLC6A4P31645 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC6A4P31645 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC6A4P31645 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
SLC6A4P31645 AL513480.1-201ENST00000451731 511 ntBASIC17.52■□□□□ 0.4
SLC6A4P31645 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.52■□□□□ 0.4
SLC6A4P31645 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A4P31645 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC6A4P31645 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC6A4P31645 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.52■□□□□ 0.4
SLC6A4P31645 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A4P31645 AC023141.13-201ENST00000604991 943 ntBASIC17.52■□□□□ 0.4
SLC6A4P31645 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC6A4P31645 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A4P31645 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A4P31645 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.52■□□□□ 0.39
SLC6A4P31645 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC6A4P31645 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.52■□□□□ 0.39
SLC6A4P31645 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SLC6A4P31645 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
SLC6A4P31645 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
SLC6A4P31645 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC6A4P31645 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC6A4P31645 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A4P31645 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SLC6A4P31645 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC6A4P31645 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A4P31645 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC6A4P31645 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SLC6A4P31645 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC6A4P31645 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SLC6A4P31645 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A4P31645 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A4P31645 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC6A4P31645 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A4P31645 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A4P31645 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A4P31645 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC6A4P31645 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A4P31645 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC6A4P31645 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC6A4P31645 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC6A4P31645 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC6A4P31645 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC6A4P31645 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SLC6A4P31645 AC139530.3-201ENST00000620344 690 ntBASIC17.51■□□□□ 0.39
SLC6A4P31645 AC055717.3-201ENST00000622967 595 ntBASIC17.51■□□□□ 0.39
SLC6A4P31645 AC007064.4-201ENST00000637740 555 ntBASIC17.51■□□□□ 0.39
SLC6A4P31645 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A4P31645 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC6A4P31645 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A4P31645 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SLC6A4P31645 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC6A4P31645 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC6A4P31645 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A4P31645 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SLC6A4P31645 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A4P31645 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A4P31645 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A4P31645 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A4P31645 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC6A4P31645 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A4P31645 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A4P31645 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A4P31645 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms