Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN6P29350 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN6P29350 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN6P29350 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPN6P29350 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN6P29350 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN6P29350 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN6P29350 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.27■□□□□ 0.2
PTPN6P29350 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN6P29350 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PTPN6P29350 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN6P29350 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PTPN6P29350 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN6P29350 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN6P29350 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN6P29350 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN6P29350 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN6P29350 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.27■□□□□ 0.2
PTPN6P29350 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PTPN6P29350 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN6P29350 POM121L3P-201ENST00000419331 1163 ntBASIC16.27■□□□□ 0.2
PTPN6P29350 KRT18P31-201ENST00000506277 1292 ntBASIC16.27■□□□□ 0.2
PTPN6P29350 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PTPN6P29350 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.27■□□□□ 0.2
PTPN6P29350 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN6P29350 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.27■□□□□ 0.2
PTPN6P29350 AC091304.2-201ENST00000564639 760 ntBASIC16.27■□□□□ 0.2
PTPN6P29350 AL732292.2-201ENST00000609649 430 ntBASIC16.27■□□□□ 0.2
PTPN6P29350 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN6P29350 DOC2GP-204ENST00000639052 2548 ntBASIC16.27■□□□□ 0.2
PTPN6P29350 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN6P29350 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PTPN6P29350 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN6P29350 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN6P29350 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN6P29350 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.27■□□□□ 0.19
PTPN6P29350 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.27■□□□□ 0.19
PTPN6P29350 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN6P29350 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
PTPN6P29350 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN6P29350 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN6P29350 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN6P29350 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN6P29350 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.26■□□□□ 0.19
PTPN6P29350 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN6P29350 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
PTPN6P29350 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN6P29350 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN6P29350 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN6P29350 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN6P29350 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN6P29350 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN6P29350 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PTPN6P29350 NUS1P2-201ENST00000417358 873 ntBASIC16.26■□□□□ 0.19
PTPN6P29350 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.26■□□□□ 0.19
PTPN6P29350 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.26■□□□□ 0.19
PTPN6P29350 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.26■□□□□ 0.19
PTPN6P29350 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.26■□□□□ 0.19
PTPN6P29350 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.26■□□□□ 0.19
PTPN6P29350 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PTPN6P29350 AC011467.2-201ENST00000598425 242 ntBASIC16.26■□□□□ 0.19
PTPN6P29350 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.26■□□□□ 0.19
PTPN6P29350 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.26■□□□□ 0.19
PTPN6P29350 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.26■□□□□ 0.19
PTPN6P29350 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN6P29350 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.26■□□□□ 0.19
PTPN6P29350 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.26■□□□□ 0.19
PTPN6P29350 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.26■□□□□ 0.19
PTPN6P29350 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN6P29350 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN6P29350 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
PTPN6P29350 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN6P29350 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.26■□□□□ 0.19
PTPN6P29350 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN6P29350 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN6P29350 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN6P29350 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN6P29350 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN6P29350 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN6P29350 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN6P29350 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.25■□□□□ 0.19
PTPN6P29350 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN6P29350 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN6P29350 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN6P29350 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN6P29350 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.25■□□□□ 0.19
PTPN6P29350 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN6P29350 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN6P29350 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN6P29350 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN6P29350 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN6P29350 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.25■□□□□ 0.19
PTPN6P29350 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PTPN6P29350 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN6P29350 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN6P29350 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN6P29350 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN6P29350 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN6P29350 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN6P29350 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms