Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 RPL37AP1-201ENST00000412502 279 ntBASIC19.83■□□□□ 0.76
POLR2AP24928 AL512361.1-201ENST00000554200 418 ntBASIC19.83■□□□□ 0.76
POLR2AP24928 NAA38-206ENST00000576384 424 ntTSL 2 BASIC19.83■□□□□ 0.76
POLR2AP24928 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
POLR2AP24928 CYP2A7P1-201ENST00000595391 815 ntBASIC19.83■□□□□ 0.76
POLR2AP24928 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
POLR2AP24928 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
POLR2AP24928 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.82■□□□□ 0.76
POLR2AP24928 AC087499.5-201ENST00000452760 1342 ntBASIC19.82■□□□□ 0.76
POLR2AP24928 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR2AP24928 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
POLR2AP24928 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
POLR2AP24928 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
POLR2AP24928 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.82■□□□□ 0.76
POLR2AP24928 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR2AP24928 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.82■□□□□ 0.76
POLR2AP24928 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR2AP24928 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
POLR2AP24928 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.82■□□□□ 0.76
POLR2AP24928 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.82■□□□□ 0.76
POLR2AP24928 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.82■□□□□ 0.76
POLR2AP24928 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
POLR2AP24928 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.82■□□□□ 0.76
POLR2AP24928 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.82■□□□□ 0.76
POLR2AP24928 AC008494.3-201ENST00000606615 944 ntBASIC19.82■□□□□ 0.76
POLR2AP24928 AL355312.1-201ENST00000407115 2176 ntBASIC19.82■□□□□ 0.76
POLR2AP24928 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR2AP24928 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
POLR2AP24928 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR2AP24928 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR2AP24928 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR2AP24928 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
POLR2AP24928 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.81■□□□□ 0.76
POLR2AP24928 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.81■□□□□ 0.76
POLR2AP24928 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.81■□□□□ 0.76
POLR2AP24928 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2AP24928 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2AP24928 TMEM14DP-201ENST00000422205 345 ntBASIC19.81■□□□□ 0.76
POLR2AP24928 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
POLR2AP24928 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.81■□□□□ 0.76
POLR2AP24928 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.81■□□□□ 0.76
POLR2AP24928 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.81■□□□□ 0.76
POLR2AP24928 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2AP24928 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
POLR2AP24928 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2AP24928 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2AP24928 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2AP24928 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2AP24928 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2AP24928 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
POLR2AP24928 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2AP24928 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.81■□□□□ 0.76
POLR2AP24928 SPDYE19P-201ENST00000338590 713 ntBASIC19.81■□□□□ 0.76
POLR2AP24928 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2AP24928 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2AP24928 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.81■□□□□ 0.76
POLR2AP24928 AL353705.2-201ENST00000428243 662 ntBASIC19.81■□□□□ 0.76
POLR2AP24928 ZNF890P-202ENST00000530367 1156 ntBASIC19.81■□□□□ 0.76
POLR2AP24928 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.81■□□□□ 0.76
POLR2AP24928 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.81■□□□□ 0.76
POLR2AP24928 LINC00895-201ENST00000629028 1637 ntBASIC19.81■□□□□ 0.76
POLR2AP24928 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.8■□□□□ 0.76
POLR2AP24928 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2AP24928 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2AP24928 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
POLR2AP24928 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2AP24928 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2AP24928 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2AP24928 EGFEM1P-202ENST00000431685 1563 ntBASIC19.8■□□□□ 0.76
POLR2AP24928 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.8■□□□□ 0.76
POLR2AP24928 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2AP24928 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.8■□□□□ 0.76
POLR2AP24928 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2AP24928 HLA-H-201ENST00000383620 1096 ntBASIC19.8■□□□□ 0.76
POLR2AP24928 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.8■□□□□ 0.76
POLR2AP24928 KRT17P8-201ENST00000540749 863 ntBASIC19.8■□□□□ 0.76
POLR2AP24928 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.8■□□□□ 0.76
POLR2AP24928 RN7SL828P-201ENST00000607615 303 ntBASIC19.8■□□□□ 0.76
POLR2AP24928 MIR6799-201ENST00000620297 69 ntBASIC19.8■□□□□ 0.76
POLR2AP24928 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.8■□□□□ 0.76
POLR2AP24928 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2AP24928 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
POLR2AP24928 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2AP24928 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.8■□□□□ 0.76
POLR2AP24928 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.8■□□□□ 0.76
POLR2AP24928 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2AP24928 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2AP24928 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2AP24928 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR2AP24928 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR2AP24928 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.79■□□□□ 0.76
POLR2AP24928 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
POLR2AP24928 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
POLR2AP24928 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.79■□□□□ 0.76
POLR2AP24928 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.79■□□□□ 0.76
POLR2AP24928 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
POLR2AP24928 AC135586.1-201ENST00000539323 574 ntBASIC19.79■□□□□ 0.76
POLR2AP24928 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.79■□□□□ 0.76
POLR2AP24928 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.79■□□□□ 0.76
POLR2AP24928 AC090164.3-201ENST00000610780 2143 ntBASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms