Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN3P20807 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN3P20807 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN3P20807 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN3P20807 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.54■□□□□ 0.24
CAPN3P20807 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CAPN3P20807 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN3P20807 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN3P20807 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CAPN3P20807 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN3P20807 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.53■□□□□ 0.24
CAPN3P20807 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN3P20807 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN3P20807 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN3P20807 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.53■□□□□ 0.24
CAPN3P20807 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN3P20807 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.53■□□□□ 0.24
CAPN3P20807 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
CAPN3P20807 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.53■□□□□ 0.24
CAPN3P20807 AL162727.3-201ENST00000635661 2787 ntBASIC16.53■□□□□ 0.24
CAPN3P20807 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN3P20807 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN3P20807 AL391005.1-201ENST00000623953 2435 ntBASIC16.53■□□□□ 0.24
CAPN3P20807 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN3P20807 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN3P20807 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN3P20807 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CAPN3P20807 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
CAPN3P20807 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.53■□□□□ 0.24
CAPN3P20807 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.53■□□□□ 0.24
CAPN3P20807 NUS1P1-201ENST00000446295 882 ntBASIC16.53■□□□□ 0.24
CAPN3P20807 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.53■□□□□ 0.24
CAPN3P20807 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.53■□□□□ 0.24
CAPN3P20807 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN3P20807 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.53■□□□□ 0.24
CAPN3P20807 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN3P20807 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.53■□□□□ 0.24
CAPN3P20807 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN3P20807 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.53■□□□□ 0.24
CAPN3P20807 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.53■□□□□ 0.24
CAPN3P20807 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CAPN3P20807 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.53■□□□□ 0.24
CAPN3P20807 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN3P20807 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN3P20807 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN3P20807 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.53■□□□□ 0.24
CAPN3P20807 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN3P20807 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN3P20807 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.53■□□□□ 0.24
CAPN3P20807 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.53■□□□□ 0.24
CAPN3P20807 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN3P20807 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CAPN3P20807 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN3P20807 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN3P20807 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN3P20807 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CAPN3P20807 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN3P20807 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CAPN3P20807 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.52■□□□□ 0.24
CAPN3P20807 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN3P20807 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN3P20807 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN3P20807 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CAPN3P20807 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN3P20807 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN3P20807 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CAPN3P20807 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN3P20807 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.52■□□□□ 0.24
CAPN3P20807 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.52■□□□□ 0.24
CAPN3P20807 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.52■□□□□ 0.24
CAPN3P20807 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN3P20807 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.52■□□□□ 0.24
CAPN3P20807 RNF126P1-202ENST00000569893 925 ntBASIC16.52■□□□□ 0.24
CAPN3P20807 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.52■□□□□ 0.24
CAPN3P20807 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN3P20807 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CAPN3P20807 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.52■□□□□ 0.24
CAPN3P20807 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CAPN3P20807 PCDHB17P-201ENST00000539533 2393 ntBASIC16.52■□□□□ 0.23
CAPN3P20807 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CAPN3P20807 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CAPN3P20807 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.52■□□□□ 0.23
CAPN3P20807 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CAPN3P20807 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.52■□□□□ 0.23
CAPN3P20807 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CAPN3P20807 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN3P20807 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN3P20807 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPN3P20807 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN3P20807 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN3P20807 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CAPN3P20807 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPN3P20807 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.51■□□□□ 0.23
CAPN3P20807 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN3P20807 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.51■□□□□ 0.23
CAPN3P20807 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN3P20807 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.51■□□□□ 0.23
CAPN3P20807 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CAPN3P20807 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN3P20807 HBZP1-201ENST00000354915 429 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms