Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.44■□□□□ 0.38
NFKB1P19838 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.44■□□□□ 0.38
NFKB1P19838 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.44■□□□□ 0.38
NFKB1P19838 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NFKB1P19838 MTDHP4-201ENST00000600287 670 ntBASIC17.44■□□□□ 0.38
NFKB1P19838 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NFKB1P19838 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
NFKB1P19838 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NFKB1P19838 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NFKB1P19838 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
NFKB1P19838 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NFKB1P19838 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.44■□□□□ 0.38
NFKB1P19838 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.44■□□□□ 0.38
NFKB1P19838 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.44■□□□□ 0.38
NFKB1P19838 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
NFKB1P19838 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
NFKB1P19838 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NFKB1P19838 AL590787.1-201ENST00000568856 1315 ntBASIC17.44■□□□□ 0.38
NFKB1P19838 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NFKB1P19838 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NFKB1P19838 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
NFKB1P19838 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NFKB1P19838 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NFKB1P19838 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NFKB1P19838 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NFKB1P19838 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NFKB1P19838 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.43■□□□□ 0.38
NFKB1P19838 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NFKB1P19838 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.43■□□□□ 0.38
NFKB1P19838 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NFKB1P19838 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
NFKB1P19838 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NFKB1P19838 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NFKB1P19838 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NFKB1P19838 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.43■□□□□ 0.38
NFKB1P19838 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.43■□□□□ 0.38
NFKB1P19838 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.43■□□□□ 0.38
NFKB1P19838 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NFKB1P19838 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
NFKB1P19838 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NFKB1P19838 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.43■□□□□ 0.38
NFKB1P19838 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.43■□□□□ 0.38
NFKB1P19838 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NFKB1P19838 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NFKB1P19838 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NFKB1P19838 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NFKB1P19838 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NFKB1P19838 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.42■□□□□ 0.38
NFKB1P19838 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NFKB1P19838 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
NFKB1P19838 SCARNA2-201ENST00000458748 420 ntBASIC17.42■□□□□ 0.38
NFKB1P19838 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.42■□□□□ 0.38
NFKB1P19838 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NFKB1P19838 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.42■□□□□ 0.38
NFKB1P19838 AL589182.2-201ENST00000619332 1049 ntBASIC17.42■□□□□ 0.38
NFKB1P19838 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NFKB1P19838 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NFKB1P19838 AGGF1P2-201ENST00000426656 2106 ntBASIC17.42■□□□□ 0.38
NFKB1P19838 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NFKB1P19838 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NFKB1P19838 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NFKB1P19838 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.42■□□□□ 0.38
NFKB1P19838 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NFKB1P19838 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NFKB1P19838 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NFKB1P19838 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NFKB1P19838 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NFKB1P19838 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
NFKB1P19838 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.41■□□□□ 0.38
NFKB1P19838 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
NFKB1P19838 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.41■□□□□ 0.38
NFKB1P19838 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.41■□□□□ 0.38
NFKB1P19838 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NFKB1P19838 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NFKB1P19838 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
NFKB1P19838 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NFKB1P19838 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NFKB1P19838 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NFKB1P19838 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NFKB1P19838 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NFKB1P19838 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NFKB1P19838 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NFKB1P19838 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NFKB1P19838 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.41■□□□□ 0.38
NFKB1P19838 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.41■□□□□ 0.38
NFKB1P19838 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
NFKB1P19838 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NFKB1P19838 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.41■□□□□ 0.38
NFKB1P19838 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.41■□□□□ 0.38
NFKB1P19838 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.41■□□□□ 0.38
NFKB1P19838 AC021087.4-201ENST00000563761 564 ntBASIC17.41■□□□□ 0.38
NFKB1P19838 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.41■□□□□ 0.38
NFKB1P19838 AC025062.2-201ENST00000605477 670 ntBASIC17.41■□□□□ 0.38
NFKB1P19838 AL139424.1-201ENST00000607572 797 ntBASIC17.41■□□□□ 0.38
NFKB1P19838 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.41■□□□□ 0.38
NFKB1P19838 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NFKB1P19838 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
NFKB1P19838 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NFKB1P19838 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NFKB1P19838 RNF216P1-203ENST00000404404 2427 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms