Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14□□□□□ -0.17
DEFA4P12838 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14□□□□□ -0.17
DEFA4P12838 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14□□□□□ -0.17
DEFA4P12838 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
DEFA4P12838 TBC1D3P5-201ENST00000579401 1545 ntBASIC14□□□□□ -0.17
DEFA4P12838 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
DEFA4P12838 REXO1L11P-201ENST00000620964 1927 ntBASIC14□□□□□ -0.17
DEFA4P12838 AL162727.3-201ENST00000635661 2787 ntBASIC14□□□□□ -0.17
DEFA4P12838 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.99□□□□□ -0.17
DEFA4P12838 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.99□□□□□ -0.17
DEFA4P12838 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
DEFA4P12838 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
DEFA4P12838 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
DEFA4P12838 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
DEFA4P12838 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
DEFA4P12838 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
DEFA4P12838 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.99□□□□□ -0.17
DEFA4P12838 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
DEFA4P12838 AC132872.4-202ENST00000622924 2756 ntBASIC13.99□□□□□ -0.17
DEFA4P12838 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.99□□□□□ -0.17
DEFA4P12838 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 AL645929.1-201ENST00000420084 975 ntBASIC13.99□□□□□ -0.17
DEFA4P12838 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.99□□□□□ -0.17
DEFA4P12838 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.99□□□□□ -0.17
DEFA4P12838 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.99□□□□□ -0.17
DEFA4P12838 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.99□□□□□ -0.17
DEFA4P12838 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
DEFA4P12838 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.99□□□□□ -0.17
DEFA4P12838 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.99□□□□□ -0.17
DEFA4P12838 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.99□□□□□ -0.17
DEFA4P12838 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.99□□□□□ -0.17
DEFA4P12838 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
DEFA4P12838 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
DEFA4P12838 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC13.99□□□□□ -0.17
DEFA4P12838 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.99□□□□□ -0.17
DEFA4P12838 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DEFA4P12838 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
DEFA4P12838 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
DEFA4P12838 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.98□□□□□ -0.17
DEFA4P12838 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.98□□□□□ -0.17
DEFA4P12838 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.98□□□□□ -0.17
DEFA4P12838 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
DEFA4P12838 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
DEFA4P12838 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.98□□□□□ -0.17
DEFA4P12838 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.98□□□□□ -0.17
DEFA4P12838 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.98□□□□□ -0.17
DEFA4P12838 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
DEFA4P12838 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 RCN1P1-201ENST00000400413 996 ntBASIC13.98□□□□□ -0.17
DEFA4P12838 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
DEFA4P12838 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.98□□□□□ -0.17
DEFA4P12838 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 KRT18P21-201ENST00000515767 1272 ntBASIC13.98□□□□□ -0.17
DEFA4P12838 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
DEFA4P12838 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.98□□□□□ -0.17
DEFA4P12838 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.98□□□□□ -0.17
DEFA4P12838 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.98□□□□□ -0.17
DEFA4P12838 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
DEFA4P12838 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 AL390719.2-201ENST00000606993 987 ntBASIC13.98□□□□□ -0.17
DEFA4P12838 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.98□□□□□ -0.17
DEFA4P12838 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms