Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM3P06753 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.27■□□□□ 0.67
TPM3P06753 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
TPM3P06753 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TPM3P06753 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM3P06753 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM3P06753 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM3P06753 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM3P06753 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM3P06753 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.26■□□□□ 0.67
TPM3P06753 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TPM3P06753 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TPM3P06753 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM3P06753 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM3P06753 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM3P06753 AC005052.1-201ENST00000625181 2492 ntBASIC19.26■□□□□ 0.67
TPM3P06753 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TPM3P06753 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM3P06753 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM3P06753 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM3P06753 SLC25A1P3-201ENST00000395415 828 ntBASIC19.26■□□□□ 0.67
TPM3P06753 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TPM3P06753 ECEL1P3-201ENST00000427961 737 ntBASIC19.26■□□□□ 0.67
TPM3P06753 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.26■□□□□ 0.67
TPM3P06753 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TPM3P06753 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.26■□□□□ 0.67
TPM3P06753 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.26■□□□□ 0.67
TPM3P06753 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TPM3P06753 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM3P06753 AC004263.2-201ENST00000617183 678 ntBASIC19.26■□□□□ 0.67
TPM3P06753 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.26■□□□□ 0.67
TPM3P06753 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM3P06753 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TPM3P06753 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM3P06753 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.26■□□□□ 0.67
TPM3P06753 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TPM3P06753 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.26■□□□□ 0.67
TPM3P06753 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM3P06753 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TPM3P06753 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TPM3P06753 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.25■□□□□ 0.67
TPM3P06753 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.25■□□□□ 0.67
TPM3P06753 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TPM3P06753 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TPM3P06753 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TPM3P06753 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TPM3P06753 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TPM3P06753 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TPM3P06753 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TPM3P06753 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC19.25■□□□□ 0.67
TPM3P06753 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TPM3P06753 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TPM3P06753 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
TPM3P06753 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.25■□□□□ 0.67
TPM3P06753 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.25■□□□□ 0.67
TPM3P06753 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.25■□□□□ 0.67
TPM3P06753 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.25■□□□□ 0.67
TPM3P06753 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TPM3P06753 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TPM3P06753 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TPM3P06753 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TPM3P06753 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TPM3P06753 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TPM3P06753 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TPM3P06753 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TPM3P06753 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TPM3P06753 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.25■□□□□ 0.67
TPM3P06753 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TPM3P06753 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TPM3P06753 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TPM3P06753 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TPM3P06753 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TPM3P06753 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TPM3P06753 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TPM3P06753 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.24■□□□□ 0.67
TPM3P06753 AC132872.4-202ENST00000622924 2756 ntBASIC19.24■□□□□ 0.67
TPM3P06753 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TPM3P06753 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TPM3P06753 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TPM3P06753 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TPM3P06753 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.24■□□□□ 0.67
TPM3P06753 MYCLP1-201ENST00000372451 1075 ntBASIC19.24■□□□□ 0.67
TPM3P06753 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.24■□□□□ 0.67
TPM3P06753 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
TPM3P06753 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.24■□□□□ 0.67
TPM3P06753 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.24■□□□□ 0.67
TPM3P06753 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.24■□□□□ 0.67
TPM3P06753 AL355075.4-201ENST00000554988 638 ntBASIC19.24■□□□□ 0.67
TPM3P06753 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.24■□□□□ 0.67
TPM3P06753 AL136038.4-201ENST00000603606 1261 ntBASIC19.24■□□□□ 0.67
TPM3P06753 AC024909.3-201ENST00000611513 2257 ntBASIC19.24■□□□□ 0.67
TPM3P06753 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.24■□□□□ 0.67
TPM3P06753 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.24■□□□□ 0.67
TPM3P06753 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TPM3P06753 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TPM3P06753 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TPM3P06753 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.24■□□□□ 0.67
TPM3P06753 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TPM3P06753 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TPM3P06753 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms