Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.03■□□□□ -0
LCATP04180 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.03■□□□□ -0
LCATP04180 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.03■□□□□ -0
LCATP04180 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.03■□□□□ -0
LCATP04180 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.03■□□□□ -0
LCATP04180 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.03■□□□□ -0
LCATP04180 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LCATP04180 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.03■□□□□ -0
LCATP04180 AP000867.4-201ENST00000641616 219 ntBASIC15.03■□□□□ -0
LCATP04180 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LCATP04180 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LCATP04180 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LCATP04180 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LCATP04180 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
LCATP04180 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LCATP04180 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.03■□□□□ -0
LCATP04180 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.03■□□□□ -0
LCATP04180 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LCATP04180 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.03■□□□□ -0
LCATP04180 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.03■□□□□ -0
LCATP04180 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.03■□□□□ -0
LCATP04180 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.03■□□□□ -0
LCATP04180 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.03■□□□□ -0
LCATP04180 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
LCATP04180 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.02■□□□□ -0
LCATP04180 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.02■□□□□ -0
LCATP04180 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.02■□□□□ -0
LCATP04180 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LCATP04180 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LCATP04180 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LCATP04180 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.02■□□□□ -0
LCATP04180 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LCATP04180 PKD1P5-201ENST00000532415 10291 ntBASIC15.02■□□□□ -0
LCATP04180 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.02■□□□□ -0
LCATP04180 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LCATP04180 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LCATP04180 SLC25A1P3-201ENST00000395415 828 ntBASIC15.02■□□□□ -0
LCATP04180 AC132008.2-207ENST00000454517 770 ntBASIC15.02■□□□□ -0
LCATP04180 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.02■□□□□ -0
LCATP04180 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.02■□□□□ -0
LCATP04180 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LCATP04180 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LCATP04180 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.02□□□□□ -0.01
LCATP04180 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
LCATP04180 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
LCATP04180 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LCATP04180 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LCATP04180 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LCATP04180 AC060834.1-201ENST00000443027 2032 ntBASIC15.02□□□□□ -0.01
LCATP04180 AC099398.1-201ENST00000567919 2776 ntBASIC15.02□□□□□ -0.01
LCATP04180 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LCATP04180 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LCATP04180 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LCATP04180 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.01□□□□□ -0.01
LCATP04180 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LCATP04180 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.01□□□□□ -0.01
LCATP04180 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LCATP04180 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCATP04180 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LCATP04180 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.01□□□□□ -0.01
LCATP04180 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCATP04180 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCATP04180 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
LCATP04180 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCATP04180 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCATP04180 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.01□□□□□ -0.01
LCATP04180 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCATP04180 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.01□□□□□ -0.01
LCATP04180 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.01□□□□□ -0.01
LCATP04180 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.01□□□□□ -0.01
LCATP04180 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.01□□□□□ -0.01
LCATP04180 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.01□□□□□ -0.01
LCATP04180 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.01□□□□□ -0.01
LCATP04180 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LCATP04180 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.01□□□□□ -0.01
LCATP04180 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.01□□□□□ -0.01
LCATP04180 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
LCATP04180 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCATP04180 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.01□□□□□ -0.01
LCATP04180 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LCATP04180 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCATP04180 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.01□□□□□ -0.01
LCATP04180 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LCATP04180 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LCATP04180 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCATP04180 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCATP04180 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LCATP04180 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LCATP04180 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LCATP04180 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
LCATP04180 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LCATP04180 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LCATP04180 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LCATP04180 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
LCATP04180 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
LCATP04180 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LCATP04180 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15□□□□□ -0.01
LCATP04180 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15□□□□□ -0.01
LCATP04180 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15□□□□□ -0.01
LCATP04180 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms