Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP1P01033 CETN4P-206ENST00000642099 2168 ntBASIC18.31■□□□□ 0.52
TIMP1P01033 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.31■□□□□ 0.52
TIMP1P01033 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP1P01033 LINC00304-203ENST00000565008 1864 ntBASIC18.31■□□□□ 0.52
TIMP1P01033 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP1P01033 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.31■□□□□ 0.52
TIMP1P01033 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP1P01033 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP1P01033 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP1P01033 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP1P01033 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP1P01033 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP1P01033 HLA-H-201ENST00000383620 1096 ntBASIC18.31■□□□□ 0.52
TIMP1P01033 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.31■□□□□ 0.52
TIMP1P01033 AL353705.2-201ENST00000428243 662 ntBASIC18.31■□□□□ 0.52
TIMP1P01033 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.31■□□□□ 0.52
TIMP1P01033 KRT18P34-201ENST00000488218 1270 ntBASIC18.31■□□□□ 0.52
TIMP1P01033 AC104794.3-201ENST00000566840 1248 ntBASIC18.31■□□□□ 0.52
TIMP1P01033 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
TIMP1P01033 MPDU1-223ENST00000582151 728 ntBASIC18.31■□□□□ 0.52
TIMP1P01033 AC004840.1-201ENST00000636359 365 ntBASIC18.31■□□□□ 0.52
TIMP1P01033 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TIMP1P01033 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP1P01033 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.31■□□□□ 0.52
TIMP1P01033 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP1P01033 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP1P01033 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP1P01033 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TIMP1P01033 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP1P01033 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP1P01033 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP1P01033 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.31■□□□□ 0.52
TIMP1P01033 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.3■□□□□ 0.52
TIMP1P01033 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TIMP1P01033 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TIMP1P01033 AC138028.4-201ENST00000564984 1845 ntBASIC18.3■□□□□ 0.52
TIMP1P01033 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TIMP1P01033 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TIMP1P01033 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TIMP1P01033 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TIMP1P01033 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TIMP1P01033 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TIMP1P01033 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.3■□□□□ 0.52
TIMP1P01033 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.3■□□□□ 0.52
TIMP1P01033 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TIMP1P01033 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TIMP1P01033 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
TIMP1P01033 RPL37AP1-201ENST00000412502 279 ntBASIC18.3■□□□□ 0.52
TIMP1P01033 AP006294.1-201ENST00000415407 339 ntBASIC18.3■□□□□ 0.52
TIMP1P01033 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.3■□□□□ 0.52
TIMP1P01033 RN7SL752P-201ENST00000463779 287 ntBASIC18.3■□□□□ 0.52
TIMP1P01033 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.3■□□□□ 0.52
TIMP1P01033 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.3■□□□□ 0.52
TIMP1P01033 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.3■□□□□ 0.52
TIMP1P01033 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.3■□□□□ 0.52
TIMP1P01033 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TIMP1P01033 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TIMP1P01033 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TIMP1P01033 AL589739.1-201ENST00000607720 493 ntBASIC18.3■□□□□ 0.52
TIMP1P01033 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
TIMP1P01033 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.3■□□□□ 0.52
TIMP1P01033 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TIMP1P01033 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TIMP1P01033 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.3■□□□□ 0.52
TIMP1P01033 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TIMP1P01033 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.3■□□□□ 0.52
TIMP1P01033 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TIMP1P01033 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TIMP1P01033 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP1P01033 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
TIMP1P01033 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP1P01033 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TIMP1P01033 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP1P01033 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.29■□□□□ 0.52
TIMP1P01033 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP1P01033 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP1P01033 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP1P01033 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP1P01033 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP1P01033 AL512384.1-201ENST00000406683 331 ntBASIC18.29■□□□□ 0.52
TIMP1P01033 DFFBP1-201ENST00000433250 979 ntBASIC18.29■□□□□ 0.52
TIMP1P01033 ACA64.2-201ENST00000459014 129 ntBASIC18.29■□□□□ 0.52
TIMP1P01033 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP1P01033 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.29■□□□□ 0.52
TIMP1P01033 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.29■□□□□ 0.52
TIMP1P01033 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.29■□□□□ 0.52
TIMP1P01033 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.29■□□□□ 0.52
TIMP1P01033 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP1P01033 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP1P01033 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP1P01033 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP1P01033 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP1P01033 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP1P01033 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP1P01033 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP1P01033 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.29■□□□□ 0.52
TIMP1P01033 AL391825.1-201ENST00000457671 1364 ntBASIC18.29■□□□□ 0.52
TIMP1P01033 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP1P01033 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms