Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TOP3BO95985 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.59■□□□□ 0.41
TOP3BO95985 AC211486.1-202ENST00000416371 468 ntBASIC17.59■□□□□ 0.41
TOP3BO95985 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TOP3BO95985 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.59■□□□□ 0.41
TOP3BO95985 AC211476.1-201ENST00000503899 468 ntBASIC17.59■□□□□ 0.41
TOP3BO95985 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.59■□□□□ 0.41
TOP3BO95985 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.59■□□□□ 0.41
TOP3BO95985 AC239800.4-201ENST00000603712 296 ntBASIC17.59■□□□□ 0.41
TOP3BO95985 LINC01451-201ENST00000623792 534 ntBASIC17.59■□□□□ 0.41
TOP3BO95985 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TOP3BO95985 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TOP3BO95985 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TOP3BO95985 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.59■□□□□ 0.41
TOP3BO95985 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TOP3BO95985 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TOP3BO95985 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TOP3BO95985 LYSMD4-203ENST00000378904 2122 ntBASIC17.59■□□□□ 0.41
TOP3BO95985 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.58■□□□□ 0.41
TOP3BO95985 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TOP3BO95985 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TOP3BO95985 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.58■□□□□ 0.41
TOP3BO95985 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TOP3BO95985 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.58■□□□□ 0.41
TOP3BO95985 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
TOP3BO95985 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.58■□□□□ 0.41
TOP3BO95985 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TOP3BO95985 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.58■□□□□ 0.41
TOP3BO95985 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TOP3BO95985 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
TOP3BO95985 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TOP3BO95985 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TOP3BO95985 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
TOP3BO95985 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.58■□□□□ 0.4
TOP3BO95985 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TOP3BO95985 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TOP3BO95985 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TOP3BO95985 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TOP3BO95985 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.58■□□□□ 0.4
TOP3BO95985 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TOP3BO95985 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.58■□□□□ 0.4
TOP3BO95985 RBM17P3-201ENST00000417687 1192 ntBASIC17.58■□□□□ 0.4
TOP3BO95985 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TOP3BO95985 AC004832.2-201ENST00000426397 482 ntBASIC17.58■□□□□ 0.4
TOP3BO95985 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.58■□□□□ 0.4
TOP3BO95985 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TOP3BO95985 KRT18P65-201ENST00000439811 1286 ntBASIC17.58■□□□□ 0.4
TOP3BO95985 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.58■□□□□ 0.4
TOP3BO95985 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.58■□□□□ 0.4
TOP3BO95985 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.58■□□□□ 0.4
TOP3BO95985 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TOP3BO95985 AC008687.5-201ENST00000593746 558 ntBASIC17.58■□□□□ 0.4
TOP3BO95985 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TOP3BO95985 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TOP3BO95985 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.58■□□□□ 0.4
TOP3BO95985 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TOP3BO95985 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TOP3BO95985 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TOP3BO95985 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TOP3BO95985 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.57■□□□□ 0.4
TOP3BO95985 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TOP3BO95985 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TOP3BO95985 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOP3BO95985 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOP3BO95985 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.57■□□□□ 0.4
TOP3BO95985 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
TOP3BO95985 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
TOP3BO95985 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOP3BO95985 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOP3BO95985 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TOP3BO95985 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TOP3BO95985 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.57■□□□□ 0.4
TOP3BO95985 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
TOP3BO95985 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TOP3BO95985 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.57■□□□□ 0.4
TOP3BO95985 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.57■□□□□ 0.4
TOP3BO95985 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.57■□□□□ 0.4
TOP3BO95985 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.57■□□□□ 0.4
TOP3BO95985 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.57■□□□□ 0.4
TOP3BO95985 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TOP3BO95985 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.57■□□□□ 0.4
TOP3BO95985 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TOP3BO95985 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.57■□□□□ 0.4
TOP3BO95985 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.57■□□□□ 0.4
TOP3BO95985 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOP3BO95985 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.57■□□□□ 0.4
TOP3BO95985 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
TOP3BO95985 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOP3BO95985 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TOP3BO95985 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOP3BO95985 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TOP3BO95985 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.57■□□□□ 0.4
TOP3BO95985 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOP3BO95985 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOP3BO95985 TP73-AS1-210ENST00000637775 1455 ntBASIC17.56■□□□□ 0.4
TOP3BO95985 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TOP3BO95985 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.56■□□□□ 0.4
TOP3BO95985 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
TOP3BO95985 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TOP3BO95985 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms