Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CBX6O95503 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX6O95503 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CBX6O95503 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.15■□□□□ 0.34
CBX6O95503 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX6O95503 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX6O95503 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX6O95503 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX6O95503 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.14■□□□□ 0.33
CBX6O95503 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CBX6O95503 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX6O95503 AC105917.1-201ENST00000506637 2539 ntBASIC17.14■□□□□ 0.33
CBX6O95503 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
CBX6O95503 AC022188.1-201ENST00000620960 1664 ntBASIC17.14■□□□□ 0.33
CBX6O95503 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.14■□□□□ 0.33
CBX6O95503 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX6O95503 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX6O95503 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.14■□□□□ 0.33
CBX6O95503 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CBX6O95503 AC004870.1-201ENST00000315132 882 ntBASIC17.14■□□□□ 0.33
CBX6O95503 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX6O95503 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.14■□□□□ 0.33
CBX6O95503 KRT17P6-201ENST00000453795 1220 ntBASIC17.14■□□□□ 0.33
CBX6O95503 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CBX6O95503 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.14■□□□□ 0.33
CBX6O95503 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.14■□□□□ 0.33
CBX6O95503 AC116407.2-201ENST00000613639 860 ntBASIC17.14■□□□□ 0.33
CBX6O95503 CR769767.2-201ENST00000622735 460 ntBASIC17.14■□□□□ 0.33
CBX6O95503 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
CBX6O95503 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.14■□□□□ 0.33
CBX6O95503 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX6O95503 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CBX6O95503 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
CBX6O95503 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.14■□□□□ 0.33
CBX6O95503 AL513523.2-202ENST00000427283 2040 ntBASIC17.14■□□□□ 0.33
CBX6O95503 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CBX6O95503 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CBX6O95503 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.14■□□□□ 0.33
CBX6O95503 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX6O95503 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBX6O95503 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.13■□□□□ 0.33
CBX6O95503 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.13■□□□□ 0.33
CBX6O95503 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBX6O95503 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CBX6O95503 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX6O95503 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX6O95503 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.13■□□□□ 0.33
CBX6O95503 TSPY26P-202ENST00000565928 3884 ntBASIC17.13■□□□□ 0.33
CBX6O95503 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBX6O95503 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX6O95503 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CBX6O95503 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.13■□□□□ 0.33
CBX6O95503 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CBX6O95503 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.13■□□□□ 0.33
CBX6O95503 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX6O95503 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.13■□□□□ 0.33
CBX6O95503 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBX6O95503 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CBX6O95503 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.13■□□□□ 0.33
CBX6O95503 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBX6O95503 PVRIG2P-201ENST00000435460 978 ntBASIC17.13■□□□□ 0.33
CBX6O95503 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CBX6O95503 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CBX6O95503 AC111152.3-201ENST00000569699 673 ntBASIC17.13■□□□□ 0.33
CBX6O95503 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.13■□□□□ 0.33
CBX6O95503 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.13■□□□□ 0.33
CBX6O95503 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CBX6O95503 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX6O95503 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CBX6O95503 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.13■□□□□ 0.33
CBX6O95503 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX6O95503 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.13■□□□□ 0.33
CBX6O95503 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBX6O95503 LINC00167-201ENST00000530583 1419 ntBASIC17.13■□□□□ 0.33
CBX6O95503 KRT8P7-201ENST00000533003 1432 ntBASIC17.13■□□□□ 0.33
CBX6O95503 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX6O95503 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX6O95503 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX6O95503 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX6O95503 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX6O95503 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX6O95503 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.12■□□□□ 0.33
CBX6O95503 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.12■□□□□ 0.33
CBX6O95503 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX6O95503 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CBX6O95503 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX6O95503 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX6O95503 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX6O95503 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX6O95503 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.12■□□□□ 0.33
CBX6O95503 FAAHP1-202ENST00000446499 1238 ntBASIC17.12■□□□□ 0.33
CBX6O95503 TSSC2-201ENST00000450217 709 ntBASIC17.12■□□□□ 0.33
CBX6O95503 RASA4DP-201ENST00000460726 1199 ntBASIC17.12■□□□□ 0.33
CBX6O95503 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.12■□□□□ 0.33
CBX6O95503 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CBX6O95503 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX6O95503 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.12■□□□□ 0.33
CBX6O95503 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CBX6O95503 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX6O95503 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms