Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SIX6O95475 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.39□□□□□ -0.11
SIX6O95475 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX6O95475 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
SIX6O95475 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.39□□□□□ -0.11
SIX6O95475 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX6O95475 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX6O95475 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.39□□□□□ -0.11
SIX6O95475 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SIX6O95475 AC005104.2-201ENST00000427818 678 ntBASIC14.39□□□□□ -0.11
SIX6O95475 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SIX6O95475 B3GAT3P1-201ENST00000471720 806 ntBASIC14.39□□□□□ -0.11
SIX6O95475 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.39□□□□□ -0.11
SIX6O95475 AC104390.1-201ENST00000555663 520 ntBASIC14.39□□□□□ -0.11
SIX6O95475 AC026271.3-201ENST00000571884 352 ntBASIC14.39□□□□□ -0.11
SIX6O95475 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SIX6O95475 MIR6786-201ENST00000616843 113 ntBASIC14.39□□□□□ -0.11
SIX6O95475 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SIX6O95475 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
SIX6O95475 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SIX6O95475 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.39□□□□□ -0.11
SIX6O95475 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SIX6O95475 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.39□□□□□ -0.11
SIX6O95475 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX6O95475 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX6O95475 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SIX6O95475 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX6O95475 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX6O95475 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.39□□□□□ -0.11
SIX6O95475 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX6O95475 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.39□□□□□ -0.11
SIX6O95475 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.39□□□□□ -0.11
SIX6O95475 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.39□□□□□ -0.11
SIX6O95475 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX6O95475 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX6O95475 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SIX6O95475 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX6O95475 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX6O95475 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SIX6O95475 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.38□□□□□ -0.11
SIX6O95475 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.38□□□□□ -0.11
SIX6O95475 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.38□□□□□ -0.11
SIX6O95475 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SIX6O95475 AC073347.1-201ENST00000421633 2643 ntBASIC14.38□□□□□ -0.11
SIX6O95475 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.38□□□□□ -0.11
SIX6O95475 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.38□□□□□ -0.11
SIX6O95475 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SIX6O95475 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.38□□□□□ -0.11
SIX6O95475 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.38□□□□□ -0.11
SIX6O95475 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.38□□□□□ -0.11
SIX6O95475 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
SIX6O95475 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.38□□□□□ -0.11
SIX6O95475 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
SIX6O95475 AC008403.3-201ENST00000598924 454 ntBASIC14.38□□□□□ -0.11
SIX6O95475 AC069544.1-201ENST00000609399 999 ntBASIC14.38□□□□□ -0.11
SIX6O95475 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.38□□□□□ -0.11
SIX6O95475 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.38□□□□□ -0.11
SIX6O95475 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SIX6O95475 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
SIX6O95475 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SIX6O95475 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SIX6O95475 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.38□□□□□ -0.11
SIX6O95475 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
SIX6O95475 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SIX6O95475 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.38□□□□□ -0.11
SIX6O95475 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SIX6O95475 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX6O95475 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.37□□□□□ -0.11
SIX6O95475 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.37□□□□□ -0.11
SIX6O95475 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SIX6O95475 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SIX6O95475 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX6O95475 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms