Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
BEST1O76090 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.92■□□□□ 0.46
BEST1O76090 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.92■□□□□ 0.46
BEST1O76090 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BEST1O76090 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BEST1O76090 HTR7P1-202ENST00000624664 4411 ntBASIC17.92■□□□□ 0.46
BEST1O76090 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BEST1O76090 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.92■□□□□ 0.46
BEST1O76090 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BEST1O76090 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
BEST1O76090 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BEST1O76090 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BEST1O76090 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.92■□□□□ 0.46
BEST1O76090 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BEST1O76090 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
BEST1O76090 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
BEST1O76090 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BEST1O76090 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BEST1O76090 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BEST1O76090 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BEST1O76090 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BEST1O76090 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BEST1O76090 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BEST1O76090 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BEST1O76090 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BEST1O76090 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.91■□□□□ 0.46
BEST1O76090 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.91■□□□□ 0.46
BEST1O76090 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BEST1O76090 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
BEST1O76090 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BEST1O76090 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BEST1O76090 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
BEST1O76090 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.91■□□□□ 0.46
BEST1O76090 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
BEST1O76090 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
BEST1O76090 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.91■□□□□ 0.46
BEST1O76090 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.91■□□□□ 0.46
BEST1O76090 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.91■□□□□ 0.46
BEST1O76090 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.91■□□□□ 0.46
BEST1O76090 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.91■□□□□ 0.46
BEST1O76090 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.91■□□□□ 0.46
BEST1O76090 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
BEST1O76090 AC124947.2-201ENST00000547118 1133 ntBASIC17.91■□□□□ 0.46
BEST1O76090 KRT19P2-202ENST00000557173 1012 ntBASIC17.91■□□□□ 0.46
BEST1O76090 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
BEST1O76090 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.91■□□□□ 0.46
BEST1O76090 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.91■□□□□ 0.46
BEST1O76090 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.91■□□□□ 0.46
BEST1O76090 BCAR1-209ENST00000546196 1340 ntBASIC17.91■□□□□ 0.46
BEST1O76090 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
BEST1O76090 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.91■□□□□ 0.46
BEST1O76090 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BEST1O76090 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BEST1O76090 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BEST1O76090 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BEST1O76090 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BEST1O76090 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BEST1O76090 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BEST1O76090 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
BEST1O76090 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.9■□□□□ 0.46
BEST1O76090 AC080080.1-201ENST00000625121 2420 ntBASIC17.9■□□□□ 0.46
BEST1O76090 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
BEST1O76090 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BEST1O76090 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
BEST1O76090 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
BEST1O76090 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
BEST1O76090 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.9■□□□□ 0.46
BEST1O76090 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BEST1O76090 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.9■□□□□ 0.46
BEST1O76090 YBX2P1-201ENST00000394192 760 ntBASIC17.9■□□□□ 0.46
BEST1O76090 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.9■□□□□ 0.46
BEST1O76090 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
BEST1O76090 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.9■□□□□ 0.46
BEST1O76090 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.9■□□□□ 0.46
BEST1O76090 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BEST1O76090 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.9■□□□□ 0.46
BEST1O76090 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.9■□□□□ 0.46
BEST1O76090 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.9■□□□□ 0.46
BEST1O76090 AC092865.5-201ENST00000545435 363 ntBASIC17.9■□□□□ 0.46
BEST1O76090 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.9■□□□□ 0.46
BEST1O76090 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.9■□□□□ 0.46
BEST1O76090 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.9■□□□□ 0.46
BEST1O76090 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BEST1O76090 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.9■□□□□ 0.46
BEST1O76090 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
BEST1O76090 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BEST1O76090 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.9■□□□□ 0.46
BEST1O76090 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
BEST1O76090 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
BEST1O76090 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BEST1O76090 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BEST1O76090 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BEST1O76090 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
BEST1O76090 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.89■□□□□ 0.45
BEST1O76090 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
BEST1O76090 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
BEST1O76090 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
BEST1O76090 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
BEST1O76090 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BEST1O76090 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms