Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CDKL5O76039 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDKL5O76039 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
CDKL5O76039 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDKL5O76039 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
CDKL5O76039 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDKL5O76039 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.92■□□□□ 0.78
CDKL5O76039 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDKL5O76039 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDKL5O76039 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL5O76039 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL5O76039 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL5O76039 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL5O76039 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.91■□□□□ 0.78
CDKL5O76039 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
CDKL5O76039 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.91■□□□□ 0.78
CDKL5O76039 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL5O76039 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.91■□□□□ 0.78
CDKL5O76039 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL5O76039 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL5O76039 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL5O76039 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.91■□□□□ 0.78
CDKL5O76039 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.91■□□□□ 0.78
CDKL5O76039 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CDKL5O76039 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL5O76039 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.91■□□□□ 0.78
CDKL5O76039 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL5O76039 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL5O76039 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CDKL5O76039 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL5O76039 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CDKL5O76039 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL5O76039 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL5O76039 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.91■□□□□ 0.78
CDKL5O76039 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL5O76039 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.91■□□□□ 0.78
CDKL5O76039 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL5O76039 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL5O76039 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL5O76039 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.9■□□□□ 0.78
CDKL5O76039 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL5O76039 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL5O76039 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL5O76039 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL5O76039 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.9■□□□□ 0.78
CDKL5O76039 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL5O76039 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
CDKL5O76039 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.9■□□□□ 0.78
CDKL5O76039 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.9■□□□□ 0.78
CDKL5O76039 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.9■□□□□ 0.78
CDKL5O76039 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CDKL5O76039 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.9■□□□□ 0.78
CDKL5O76039 NKILA-202ENST00000614771 2598 ntBASIC19.9■□□□□ 0.78
CDKL5O76039 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
CDKL5O76039 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.9■□□□□ 0.78
CDKL5O76039 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL5O76039 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL5O76039 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CDKL5O76039 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL5O76039 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CDKL5O76039 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL5O76039 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL5O76039 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL5O76039 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL5O76039 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CDKL5O76039 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
CDKL5O76039 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL5O76039 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL5O76039 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL5O76039 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CDKL5O76039 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.89■□□□□ 0.77
CDKL5O76039 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.89■□□□□ 0.77
CDKL5O76039 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.89■□□□□ 0.77
CDKL5O76039 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL5O76039 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL5O76039 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.89■□□□□ 0.77
CDKL5O76039 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL5O76039 LAGE3P1-201ENST00000425356 484 ntBASIC19.89■□□□□ 0.77
CDKL5O76039 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL5O76039 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL5O76039 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.89■□□□□ 0.77
CDKL5O76039 AP002490.2-201ENST00000524791 560 ntBASIC19.89■□□□□ 0.77
CDKL5O76039 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.89■□□□□ 0.77
CDKL5O76039 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL5O76039 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.89■□□□□ 0.77
CDKL5O76039 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL5O76039 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.89■□□□□ 0.77
CDKL5O76039 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.89■□□□□ 0.77
CDKL5O76039 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.89■□□□□ 0.77
CDKL5O76039 AC025062.2-201ENST00000605477 670 ntBASIC19.89■□□□□ 0.77
CDKL5O76039 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CDKL5O76039 AC004706.3-202ENST00000621574 984 ntBASIC19.89■□□□□ 0.77
CDKL5O76039 AC106886.4-201ENST00000623557 2502 ntBASIC19.89■□□□□ 0.77
CDKL5O76039 AL021920.2-201ENST00000624828 1351 ntBASIC19.89■□□□□ 0.77
CDKL5O76039 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL5O76039 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL5O76039 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL5O76039 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL5O76039 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CDKL5O76039 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms