Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
TRIM3O75382 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM3O75382 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM3O75382 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM3O75382 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM3O75382 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM3O75382 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM3O75382 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
TRIM3O75382 AC079776.2-201ENST00000641154 1609 ntBASIC16.04■□□□□ 0.16
TRIM3O75382 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
TRIM3O75382 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM3O75382 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM3O75382 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM3O75382 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM3O75382 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM3O75382 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM3O75382 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
TRIM3O75382 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM3O75382 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM3O75382 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM3O75382 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM3O75382 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM3O75382 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRIM3O75382 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM3O75382 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM3O75382 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM3O75382 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM3O75382 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
TRIM3O75382 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM3O75382 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM3O75382 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM3O75382 AC018712.1-201ENST00000455767 687 ntBASIC16.03■□□□□ 0.16
TRIM3O75382 RNPS1P1-201ENST00000507437 918 ntBASIC16.03■□□□□ 0.16
TRIM3O75382 AC073648.2-201ENST00000510116 352 ntBASIC16.03■□□□□ 0.16
TRIM3O75382 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM3O75382 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM3O75382 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM3O75382 NKAPP1-205ENST00000585790 367 ntBASIC16.03■□□□□ 0.16
TRIM3O75382 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM3O75382 AL773604.1-201ENST00000617417 272 ntBASIC16.03■□□□□ 0.16
TRIM3O75382 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM3O75382 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM3O75382 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRIM3O75382 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM3O75382 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
TRIM3O75382 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM3O75382 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM3O75382 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM3O75382 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TRIM3O75382 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM3O75382 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM3O75382 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM3O75382 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM3O75382 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM3O75382 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM3O75382 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM3O75382 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM3O75382 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM3O75382 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM3O75382 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM3O75382 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRIM3O75382 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM3O75382 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.02■□□□□ 0.16
TRIM3O75382 AL023806.1-201ENST00000603994 1649 ntBASIC16.02■□□□□ 0.16
TRIM3O75382 HLA-A-201ENST00000376802 1334 ntBASIC16.02■□□□□ 0.16
TRIM3O75382 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM3O75382 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM3O75382 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM3O75382 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM3O75382 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM3O75382 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM3O75382 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM3O75382 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM3O75382 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM3O75382 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM3O75382 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM3O75382 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM3O75382 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM3O75382 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRIM3O75382 SPDYE21P-201ENST00000413323 827 ntBASIC16.02■□□□□ 0.16
TRIM3O75382 AC002558.1-201ENST00000488906 803 ntBASIC16.02■□□□□ 0.16
TRIM3O75382 RNA5SP419-201ENST00000515908 135 ntBASIC16.02■□□□□ 0.16
TRIM3O75382 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM3O75382 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.02■□□□□ 0.16
TRIM3O75382 AC021087.4-201ENST00000563761 564 ntBASIC16.02■□□□□ 0.16
TRIM3O75382 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.02■□□□□ 0.16
TRIM3O75382 AC109462.3-201ENST00000573934 613 ntBASIC16.02■□□□□ 0.16
TRIM3O75382 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM3O75382 AC148477.8-201ENST00000624298 468 ntBASIC16.02■□□□□ 0.16
TRIM3O75382 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRIM3O75382 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM3O75382 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM3O75382 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM3O75382 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM3O75382 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM3O75382 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.02■□□□□ 0.15
TRIM3O75382 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM3O75382 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TRIM3O75382 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.02■□□□□ 0.15
TRIM3O75382 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms