Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CDH16O75309 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH16O75309 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH16O75309 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH16O75309 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH16O75309 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH16O75309 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH16O75309 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CDH16O75309 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH16O75309 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH16O75309 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH16O75309 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH16O75309 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH16O75309 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH16O75309 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
CDH16O75309 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH16O75309 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH16O75309 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH16O75309 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CDH16O75309 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH16O75309 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.35■□□□□ 0.37
CDH16O75309 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH16O75309 AL023973.1-201ENST00000624619 620 ntBASIC17.35■□□□□ 0.37
CDH16O75309 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH16O75309 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH16O75309 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CDH16O75309 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH16O75309 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH16O75309 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH16O75309 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH16O75309 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH16O75309 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH16O75309 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH16O75309 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH16O75309 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
CDH16O75309 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH16O75309 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH16O75309 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH16O75309 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH16O75309 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH16O75309 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CDH16O75309 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
CDH16O75309 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CDH16O75309 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 GPR89P-201ENST00000407924 1495 ntBASIC17.34■□□□□ 0.37
CDH16O75309 AC007967.3-201ENST00000434308 558 ntBASIC17.34■□□□□ 0.37
CDH16O75309 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CDH16O75309 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH16O75309 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 ZNF444P1-201ENST00000559497 298 ntBASIC17.34■□□□□ 0.37
CDH16O75309 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 AC111152.3-201ENST00000569699 673 ntBASIC17.34■□□□□ 0.37
CDH16O75309 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH16O75309 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDH16O75309 AC132872.4-202ENST00000622924 2756 ntBASIC17.34■□□□□ 0.37
CDH16O75309 AL596257.1-201ENST00000641463 2694 ntBASIC17.34■□□□□ 0.37
CDH16O75309 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH16O75309 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.34■□□□□ 0.37
CDH16O75309 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDH16O75309 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
CDH16O75309 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDH16O75309 AL645728.1-201ENST00000366221 2101 ntBASIC17.33■□□□□ 0.37
CDH16O75309 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDH16O75309 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDH16O75309 AL391256.1-201ENST00000443260 1855 ntBASIC17.33■□□□□ 0.37
CDH16O75309 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.33■□□□□ 0.37
CDH16O75309 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CDH16O75309 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDH16O75309 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.33■□□□□ 0.37
CDH16O75309 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CDH16O75309 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.33■□□□□ 0.36
CDH16O75309 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH16O75309 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH16O75309 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CDH16O75309 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH16O75309 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH16O75309 LIN28AP1-201ENST00000429574 405 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms