Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.26■□□□□ 0.35
SMAD6O43541 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.26■□□□□ 0.35
SMAD6O43541 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD6O43541 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD6O43541 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.26■□□□□ 0.35
SMAD6O43541 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.26■□□□□ 0.35
SMAD6O43541 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SMAD6O43541 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD6O43541 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.26■□□□□ 0.35
SMAD6O43541 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.26■□□□□ 0.35
SMAD6O43541 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD6O43541 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.26■□□□□ 0.35
SMAD6O43541 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD6O43541 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD6O43541 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD6O43541 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SMAD6O43541 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD6O43541 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD6O43541 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD6O43541 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SMAD6O43541 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD6O43541 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.25■□□□□ 0.35
SMAD6O43541 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD6O43541 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD6O43541 UPF3AP3-201ENST00000420996 769 ntBASIC17.25■□□□□ 0.35
SMAD6O43541 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.25■□□□□ 0.35
SMAD6O43541 MCCD1P2-201ENST00000423228 335 ntBASIC17.25■□□□□ 0.35
SMAD6O43541 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.25■□□□□ 0.35
SMAD6O43541 AL513480.1-201ENST00000451731 511 ntBASIC17.25■□□□□ 0.35
SMAD6O43541 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SMAD6O43541 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.25■□□□□ 0.35
SMAD6O43541 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.25■□□□□ 0.35
SMAD6O43541 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.25■□□□□ 0.35
SMAD6O43541 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.25■□□□□ 0.35
SMAD6O43541 PDPK2P-202ENST00000562415 1191 ntBASIC17.25■□□□□ 0.35
SMAD6O43541 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.25■□□□□ 0.35
SMAD6O43541 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD6O43541 AC023141.13-201ENST00000604991 943 ntBASIC17.25■□□□□ 0.35
SMAD6O43541 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.25■□□□□ 0.35
SMAD6O43541 AC139530.3-201ENST00000620344 690 ntBASIC17.25■□□□□ 0.35
SMAD6O43541 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.25■□□□□ 0.35
SMAD6O43541 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SMAD6O43541 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.25■□□□□ 0.35
SMAD6O43541 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SMAD6O43541 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD6O43541 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SMAD6O43541 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD6O43541 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD6O43541 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SMAD6O43541 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SMAD6O43541 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SMAD6O43541 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD6O43541 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SMAD6O43541 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD6O43541 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.24■□□□□ 0.35
SMAD6O43541 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD6O43541 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD6O43541 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD6O43541 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SMAD6O43541 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.24■□□□□ 0.35
SMAD6O43541 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD6O43541 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD6O43541 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD6O43541 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD6O43541 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.24■□□□□ 0.35
SMAD6O43541 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD6O43541 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.24■□□□□ 0.35
SMAD6O43541 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD6O43541 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
SMAD6O43541 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.24■□□□□ 0.35
SMAD6O43541 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.24■□□□□ 0.35
SMAD6O43541 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD6O43541 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.24■□□□□ 0.35
SMAD6O43541 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.24■□□□□ 0.35
SMAD6O43541 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.24■□□□□ 0.35
SMAD6O43541 MTDHP5-201ENST00000598980 586 ntBASIC17.24■□□□□ 0.35
SMAD6O43541 AC055717.3-201ENST00000622967 595 ntBASIC17.24■□□□□ 0.35
SMAD6O43541 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD6O43541 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD6O43541 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD6O43541 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD6O43541 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
SMAD6O43541 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SMAD6O43541 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD6O43541 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD6O43541 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD6O43541 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD6O43541 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD6O43541 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD6O43541 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
SMAD6O43541 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMAD6O43541 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD6O43541 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD6O43541 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SMAD6O43541 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.23■□□□□ 0.35
SMAD6O43541 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD6O43541 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD6O43541 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD6O43541 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD6O43541 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms