Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.44■□□□□ 0.38
RIPK2O43353 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.43■□□□□ 0.38
RIPK2O43353 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RIPK2O43353 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RIPK2O43353 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RIPK2O43353 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.43■□□□□ 0.38
RIPK2O43353 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.43■□□□□ 0.38
RIPK2O43353 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RIPK2O43353 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RIPK2O43353 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RIPK2O43353 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RIPK2O43353 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RIPK2O43353 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RIPK2O43353 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RIPK2O43353 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.43■□□□□ 0.38
RIPK2O43353 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RIPK2O43353 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
RIPK2O43353 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RIPK2O43353 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.43■□□□□ 0.38
RIPK2O43353 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RIPK2O43353 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RIPK2O43353 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
RIPK2O43353 AC103702.1-201ENST00000548801 2630 ntBASIC17.43■□□□□ 0.38
RIPK2O43353 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RIPK2O43353 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.43■□□□□ 0.38
RIPK2O43353 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RIPK2O43353 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.43■□□□□ 0.38
RIPK2O43353 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RIPK2O43353 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RIPK2O43353 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.42■□□□□ 0.38
RIPK2O43353 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.42■□□□□ 0.38
RIPK2O43353 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RIPK2O43353 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.42■□□□□ 0.38
RIPK2O43353 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RIPK2O43353 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RIPK2O43353 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.42■□□□□ 0.38
RIPK2O43353 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
RIPK2O43353 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RIPK2O43353 MTHFR-217ENST00000641820 1569 ntBASIC17.42■□□□□ 0.38
RIPK2O43353 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RIPK2O43353 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.42■□□□□ 0.38
RIPK2O43353 AC103564.2-201ENST00000432853 1299 ntBASIC17.42■□□□□ 0.38
RIPK2O43353 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.42■□□□□ 0.38
RIPK2O43353 COX11P1-201ENST00000489116 835 ntBASIC17.42■□□□□ 0.38
RIPK2O43353 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.42■□□□□ 0.38
RIPK2O43353 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
RIPK2O43353 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.42■□□□□ 0.38
RIPK2O43353 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RIPK2O43353 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RIPK2O43353 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RIPK2O43353 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
RIPK2O43353 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RIPK2O43353 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.42■□□□□ 0.38
RIPK2O43353 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RIPK2O43353 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.42■□□□□ 0.38
RIPK2O43353 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.42■□□□□ 0.38
RIPK2O43353 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RIPK2O43353 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIPK2O43353 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIPK2O43353 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIPK2O43353 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIPK2O43353 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIPK2O43353 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.41■□□□□ 0.38
RIPK2O43353 AC125634.1-201ENST00000438758 1403 ntBASIC17.41■□□□□ 0.38
RIPK2O43353 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RIPK2O43353 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RIPK2O43353 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIPK2O43353 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIPK2O43353 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIPK2O43353 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIPK2O43353 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.41■□□□□ 0.38
RIPK2O43353 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.41■□□□□ 0.38
RIPK2O43353 SLC25A3P1-201ENST00000443844 931 ntBASIC17.41■□□□□ 0.38
RIPK2O43353 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RIPK2O43353 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
RIPK2O43353 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.41■□□□□ 0.38
RIPK2O43353 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.41■□□□□ 0.38
RIPK2O43353 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.41■□□□□ 0.38
RIPK2O43353 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIPK2O43353 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.41■□□□□ 0.38
RIPK2O43353 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIPK2O43353 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIPK2O43353 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIPK2O43353 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIPK2O43353 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
RIPK2O43353 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIPK2O43353 TUBB8P12-201ENST00000308911 1335 ntBASIC17.41■□□□□ 0.38
RIPK2O43353 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIPK2O43353 TUBB7P-202ENST00000428444 1305 ntBASIC17.41■□□□□ 0.38
RIPK2O43353 TUBB8P7-204ENST00000567960 1332 ntBASIC17.41■□□□□ 0.38
RIPK2O43353 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RIPK2O43353 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.41■□□□□ 0.38
RIPK2O43353 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIPK2O43353 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIPK2O43353 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIPK2O43353 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIPK2O43353 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.41■□□□□ 0.38
RIPK2O43353 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.41■□□□□ 0.38
RIPK2O43353 AC009336.1-201ENST00000608941 1553 ntBASIC17.4■□□□□ 0.38
RIPK2O43353 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms