Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UPK2O00526 RCN1P2-201ENST00000398357 915 ntBASIC13.77□□□□□ -0.21
UPK2O00526 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.77□□□□□ -0.21
UPK2O00526 PCED1CP-201ENST00000419887 785 ntBASIC13.77□□□□□ -0.21
UPK2O00526 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.77□□□□□ -0.21
UPK2O00526 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
UPK2O00526 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UPK2O00526 TNRC18P3-201ENST00000441896 2691 ntBASIC13.77□□□□□ -0.21
UPK2O00526 AP002383.4-201ENST00000442518 975 ntBASIC13.77□□□□□ -0.21
UPK2O00526 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UPK2O00526 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK2O00526 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.77□□□□□ -0.21
UPK2O00526 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK2O00526 PCDHB19P-201ENST00000570871 2371 ntBASIC13.77□□□□□ -0.21
UPK2O00526 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.77□□□□□ -0.21
UPK2O00526 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
UPK2O00526 AP002414.4-201ENST00000589764 1148 ntBASIC13.77□□□□□ -0.21
UPK2O00526 BNIP3P18-201ENST00000593976 575 ntBASIC13.77□□□□□ -0.21
UPK2O00526 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
UPK2O00526 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.77□□□□□ -0.21
UPK2O00526 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK2O00526 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK2O00526 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK2O00526 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK2O00526 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK2O00526 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
UPK2O00526 AL603756.1-201ENST00000606511 2163 ntBASIC13.76□□□□□ -0.21
UPK2O00526 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK2O00526 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK2O00526 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.76□□□□□ -0.21
UPK2O00526 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK2O00526 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK2O00526 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK2O00526 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.76□□□□□ -0.21
UPK2O00526 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
UPK2O00526 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK2O00526 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.76□□□□□ -0.21
UPK2O00526 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.76□□□□□ -0.21
UPK2O00526 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK2O00526 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.76□□□□□ -0.21
UPK2O00526 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
UPK2O00526 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
UPK2O00526 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK2O00526 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK2O00526 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
UPK2O00526 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
UPK2O00526 TUBB8P12-201ENST00000308911 1335 ntBASIC13.76□□□□□ -0.21
UPK2O00526 TUBB7P-202ENST00000428444 1305 ntBASIC13.76□□□□□ -0.21
UPK2O00526 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK2O00526 TUBB8P7-204ENST00000567960 1332 ntBASIC13.76□□□□□ -0.21
UPK2O00526 UBALD1-205ENST00000590891 2641 ntBASIC13.76□□□□□ -0.21
UPK2O00526 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK2O00526 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK2O00526 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
UPK2O00526 AL020989.1-201ENST00000422979 469 ntBASIC13.76□□□□□ -0.21
UPK2O00526 IGHV3-47-201ENST00000425060 335 ntBASIC13.76□□□□□ -0.21
UPK2O00526 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
UPK2O00526 LINC00265-3P-201ENST00000447588 903 ntBASIC13.76□□□□□ -0.21
UPK2O00526 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
UPK2O00526 AP002490.2-201ENST00000524791 560 ntBASIC13.76□□□□□ -0.21
UPK2O00526 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK2O00526 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.76□□□□□ -0.21
UPK2O00526 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.76□□□□□ -0.21
UPK2O00526 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
UPK2O00526 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK2O00526 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.76□□□□□ -0.21
UPK2O00526 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK2O00526 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
UPK2O00526 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK2O00526 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK2O00526 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK2O00526 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
UPK2O00526 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK2O00526 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK2O00526 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK2O00526 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK2O00526 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK2O00526 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK2O00526 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK2O00526 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK2O00526 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK2O00526 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK2O00526 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK2O00526 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.75□□□□□ -0.21
UPK2O00526 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK2O00526 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK2O00526 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK2O00526 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UPK2O00526 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.75□□□□□ -0.21
UPK2O00526 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.75□□□□□ -0.21
UPK2O00526 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK2O00526 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
UPK2O00526 IER3-202ENST00000376377 1350 ntBASIC13.75□□□□□ -0.21
UPK2O00526 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK2O00526 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK2O00526 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
UPK2O00526 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
UPK2O00526 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK2O00526 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.75□□□□□ -0.21
UPK2O00526 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms