Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX39AO00148 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX39AO00148 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
DDX39AO00148 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX39AO00148 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX39AO00148 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
DDX39AO00148 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX39AO00148 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX39AO00148 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX39AO00148 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
DDX39AO00148 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX39AO00148 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX39AO00148 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX39AO00148 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
DDX39AO00148 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.25■□□□□ 0.67
DDX39AO00148 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX39AO00148 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.25■□□□□ 0.67
DDX39AO00148 AC002347.1-201ENST00000569543 541 ntBASIC19.25■□□□□ 0.67
DDX39AO00148 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.25■□□□□ 0.67
DDX39AO00148 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.25■□□□□ 0.67
DDX39AO00148 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
DDX39AO00148 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX39AO00148 BCAR1-209ENST00000546196 1340 ntBASIC19.25■□□□□ 0.67
DDX39AO00148 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.24■□□□□ 0.67
DDX39AO00148 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
DDX39AO00148 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.24■□□□□ 0.67
DDX39AO00148 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.24■□□□□ 0.67
DDX39AO00148 AC116353.5-201ENST00000638148 1699 ntBASIC19.24■□□□□ 0.67
DDX39AO00148 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDX39AO00148 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
DDX39AO00148 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX39AO00148 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
DDX39AO00148 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDX39AO00148 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDX39AO00148 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.24■□□□□ 0.67
DDX39AO00148 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDX39AO00148 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX39AO00148 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX39AO00148 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.24■□□□□ 0.67
DDX39AO00148 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.24■□□□□ 0.67
DDX39AO00148 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.24■□□□□ 0.67
DDX39AO00148 AC004877.2-201ENST00000623941 599 ntBASIC19.24■□□□□ 0.67
DDX39AO00148 AC139713.2-201ENST00000641328 2723 ntBASIC19.24■□□□□ 0.67
DDX39AO00148 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX39AO00148 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
DDX39AO00148 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX39AO00148 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX39AO00148 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.24■□□□□ 0.67
DDX39AO00148 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX39AO00148 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX39AO00148 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDX39AO00148 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDX39AO00148 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
DDX39AO00148 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.24■□□□□ 0.67
DDX39AO00148 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX39AO00148 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.23■□□□□ 0.67
DDX39AO00148 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.23■□□□□ 0.67
DDX39AO00148 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX39AO00148 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
DDX39AO00148 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX39AO00148 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX39AO00148 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX39AO00148 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
DDX39AO00148 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
DDX39AO00148 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
DDX39AO00148 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.23■□□□□ 0.67
DDX39AO00148 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX39AO00148 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX39AO00148 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX39AO00148 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX39AO00148 MIR1233-2-201ENST00000408138 82 ntBASIC19.23■□□□□ 0.67
DDX39AO00148 MIR1233-1-201ENST00000408722 82 ntBASIC19.23■□□□□ 0.67
DDX39AO00148 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.23■□□□□ 0.67
DDX39AO00148 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
DDX39AO00148 CXCL1P1-201ENST00000502804 216 ntBASIC19.23■□□□□ 0.67
DDX39AO00148 AC006538.3-201ENST00000612495 578 ntBASIC19.23■□□□□ 0.67
DDX39AO00148 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.23■□□□□ 0.67
DDX39AO00148 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX39AO00148 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDX39AO00148 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.23■□□□□ 0.67
DDX39AO00148 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX39AO00148 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX39AO00148 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX39AO00148 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX39AO00148 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDX39AO00148 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.22■□□□□ 0.67
DDX39AO00148 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.22■□□□□ 0.67
DDX39AO00148 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
DDX39AO00148 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX39AO00148 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
DDX39AO00148 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX39AO00148 AC002310.6-201ENST00000624451 1377 ntBASIC19.22■□□□□ 0.67
DDX39AO00148 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX39AO00148 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX39AO00148 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX39AO00148 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
DDX39AO00148 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX39AO00148 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.22■□□□□ 0.67
DDX39AO00148 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDX39AO00148 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms