Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 ESPL1-201ENST00000257934 6623 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 SERBP1P1-201ENST00000396021 1160 ntBASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 SERP1-208ENST00000491660 830 ntTSL 2 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 AC138907.5-202ENST00000569484 235 ntBASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 AL356740.2-201ENST00000601559 647 ntBASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 KRT87P-202ENST00000534226 1464 ntBASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 AC006058.4-201ENST00000624016 1670 ntBASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 AC007191.1-201ENST00000623179 2995 ntBASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 AL139385.1-201ENST00000611744 3272 ntBASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 MAML2-201ENST00000524717 7106 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 CUL5-201ENST00000393094 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms