Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
YJEFN3A6XGL0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
YJEFN3A6XGL0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
YJEFN3A6XGL0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
YJEFN3A6XGL0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
YJEFN3A6XGL0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 RNA5SP416-201ENST00000516838 111 ntBASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 PGAM5P1-201ENST00000518923 814 ntBASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 AC018845.2-201ENST00000568326 409 ntBASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 AC010507.1-201ENST00000633895 436 ntBASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 AC080080.1-201ENST00000625121 2420 ntBASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
YJEFN3A6XGL0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
YJEFN3A6XGL0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.79■□□□□ 0.44
YJEFN3A6XGL0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
YJEFN3A6XGL0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
YJEFN3A6XGL0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
YJEFN3A6XGL0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
YJEFN3A6XGL0 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms