Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 SLC22A20-204ENST00000530038 1673 ntBASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 KRT43P-201ENST00000434019 910 ntBASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 AC114501.2-201ENST00000439631 535 ntBASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 KRT18P34-201ENST00000488218 1270 ntBASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 TPRX2P-201ENST00000535362 881 ntBASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 BANF1P1-201ENST00000553684 263 ntBASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 AC091167.2-201ENST00000579581 588 ntBASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 AP001350.2-201ENST00000625104 1094 ntBASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM88BA6NKF7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM88BA6NKF7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM88BA6NKF7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM88BA6NKF7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM88BA6NKF7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC19.65■□□□□ 0.74
TMEM88BA6NKF7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC19.65■□□□□ 0.74
TMEM88BA6NKF7 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM88BA6NKF7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC19.65■□□□□ 0.74
TMEM88BA6NKF7 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM88BA6NKF7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC19.65■□□□□ 0.74
TMEM88BA6NKF7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TMEM88BA6NKF7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM88BA6NKF7 SRD5A3P1-201ENST00000603021 949 ntBASIC19.65■□□□□ 0.74
TMEM88BA6NKF7 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.65■□□□□ 0.74
TMEM88BA6NKF7 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM88BA6NKF7 WNT11-204ENST00000621122 789 ntTSL 5 BASIC19.65■□□□□ 0.74
TMEM88BA6NKF7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM88BA6NKF7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.65■□□□□ 0.74
TMEM88BA6NKF7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.65■□□□□ 0.74
TMEM88BA6NKF7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM88BA6NKF7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.65■□□□□ 0.74
TMEM88BA6NKF7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM88BA6NKF7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TMEM88BA6NKF7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TMEM88BA6NKF7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
TMEM88BA6NKF7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TMEM88BA6NKF7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TMEM88BA6NKF7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
TMEM88BA6NKF7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM88BA6NKF7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM88BA6NKF7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM88BA6NKF7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM88BA6NKF7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC19.64■□□□□ 0.73
TMEM88BA6NKF7 FAM220BP-201ENST00000377689 816 ntBASIC19.64■□□□□ 0.73
TMEM88BA6NKF7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.64■□□□□ 0.73
TMEM88BA6NKF7 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM88BA6NKF7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.64■□□□□ 0.73
TMEM88BA6NKF7 AL512361.1-201ENST00000554200 418 ntBASIC19.64■□□□□ 0.73
TMEM88BA6NKF7 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC19.64■□□□□ 0.73
TMEM88BA6NKF7 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
TMEM88BA6NKF7 RHOQP1-201ENST00000555758 579 ntBASIC19.64■□□□□ 0.73
TMEM88BA6NKF7 AL139327.4-201ENST00000612362 153 ntBASIC19.64■□□□□ 0.73
TMEM88BA6NKF7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM88BA6NKF7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM88BA6NKF7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM88BA6NKF7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM88BA6NKF7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM88BA6NKF7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.64■□□□□ 0.73
TMEM88BA6NKF7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
TMEM88BA6NKF7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM88BA6NKF7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.64■□□□□ 0.73
TMEM88BA6NKF7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms