Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC144AA2RUR9 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
CCDC144AA2RUR9 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC144AA2RUR9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC144AA2RUR9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC144AA2RUR9 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC144AA2RUR9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
CCDC144AA2RUR9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
CCDC144AA2RUR9 LINC00896-202ENST00000609602 2128 ntBASIC24.41■■□□□ 1.5
CCDC144AA2RUR9 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CCDC144AA2RUR9 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC144AA2RUR9 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC144AA2RUR9 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC24.41■■□□□ 1.5
CCDC144AA2RUR9 PMS2P4-201ENST00000412466 1052 ntBASIC24.41■■□□□ 1.5
CCDC144AA2RUR9 FAM8A3P-201ENST00000427218 844 ntBASIC24.41■■□□□ 1.5
CCDC144AA2RUR9 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC144AA2RUR9 FAM58DP-201ENST00000428076 619 ntBASIC24.41■■□□□ 1.5
CCDC144AA2RUR9 AC005237.2-201ENST00000434368 219 ntBASIC24.41■■□□□ 1.5
CCDC144AA2RUR9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC24.41■■□□□ 1.5
CCDC144AA2RUR9 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC24.41■■□□□ 1.5
CCDC144AA2RUR9 CYP2A7P1-201ENST00000595391 815 ntBASIC24.41■■□□□ 1.5
CCDC144AA2RUR9 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC24.41■■□□□ 1.5
CCDC144AA2RUR9 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC24.41■■□□□ 1.5
CCDC144AA2RUR9 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC24.41■■□□□ 1.5
CCDC144AA2RUR9 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CCDC144AA2RUR9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC24.41■■□□□ 1.5
CCDC144AA2RUR9 PP12613-201ENST00000424958 2230 ntBASIC24.41■■□□□ 1.5
CCDC144AA2RUR9 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC24.4■■□□□ 1.5
CCDC144AA2RUR9 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC144AA2RUR9 LINC00895-201ENST00000629028 1637 ntBASIC24.4■■□□□ 1.5
CCDC144AA2RUR9 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
CCDC144AA2RUR9 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC24.4■■□□□ 1.5
CCDC144AA2RUR9 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC144AA2RUR9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC24.4■■□□□ 1.5
CCDC144AA2RUR9 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC24.4■■□□□ 1.5
CCDC144AA2RUR9 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC144AA2RUR9 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC24.4■■□□□ 1.5
CCDC144AA2RUR9 AC004449.1-201ENST00000564240 433 ntBASIC24.4■■□□□ 1.5
CCDC144AA2RUR9 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC24.4■■□□□ 1.5
CCDC144AA2RUR9 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC24.4■■□□□ 1.5
CCDC144AA2RUR9 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC144AA2RUR9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC24.4■■□□□ 1.5
CCDC144AA2RUR9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC144AA2RUR9 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC144AA2RUR9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC144AA2RUR9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
CCDC144AA2RUR9 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC24.39■■□□□ 1.5
CCDC144AA2RUR9 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCDC144AA2RUR9 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CCDC144AA2RUR9 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC24.39■■□□□ 1.5
CCDC144AA2RUR9 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC24.39■■□□□ 1.5
CCDC144AA2RUR9 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC24.39■■□□□ 1.5
CCDC144AA2RUR9 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC24.39■■□□□ 1.5
CCDC144AA2RUR9 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC24.39■■□□□ 1.5
CCDC144AA2RUR9 AC093512.1-201ENST00000617969 520 ntBASIC24.39■■□□□ 1.5
CCDC144AA2RUR9 AP001350.2-201ENST00000625104 1094 ntBASIC24.39■■□□□ 1.5
CCDC144AA2RUR9 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
CCDC144AA2RUR9 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC144AA2RUR9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC144AA2RUR9 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
CCDC144AA2RUR9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC144AA2RUR9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 AC016027.1-202ENST00000607927 1699 ntBASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 AC025678.2-201ENST00000562061 970 ntBASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 LINC01225-203ENST00000563550 1244 ntBASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 Z92544.3-201ENST00000624747 417 ntBASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 AC084121.4-201ENST00000641598 221 ntBASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 AF228730.8-201ENST00000642140 221 ntBASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 AC108860.2-201ENST00000562760 2183 ntBASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC144AA2RUR9 AC018470.1-201ENST00000624790 3129 ntBASIC24.37■■□□□ 1.49
CCDC144AA2RUR9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms