Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AC007967.3-201ENST00000434308 558 ntBASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AF228730.7-201ENST00000641842 219 ntBASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 LYSMD4-203ENST00000378904 2122 ntBASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TCRBV4S1A1TA0A5B7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AC005104.2-201ENST00000427818 678 ntBASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AC018712.1-201ENST00000455767 687 ntBASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms