Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.06■□□□□ 0.16
TCRBV3S1A0A5B6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
TCRBV3S1A0A5B6 IGHGP-201ENST00000390555 1178 ntBASIC16.06■□□□□ 0.16
TCRBV3S1A0A5B6 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.06■□□□□ 0.16
TCRBV3S1A0A5B6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.06■□□□□ 0.16
TCRBV3S1A0A5B6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TCRBV3S1A0A5B6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
TCRBV3S1A0A5B6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.06■□□□□ 0.16
TCRBV3S1A0A5B6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TCRBV3S1A0A5B6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TCRBV3S1A0A5B6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
TCRBV3S1A0A5B6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TCRBV3S1A0A5B6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TCRBV3S1A0A5B6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TCRBV3S1A0A5B6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TCRBV3S1A0A5B6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TCRBV3S1A0A5B6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TCRBV3S1A0A5B6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TCRBV3S1A0A5B6 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TCRBV3S1A0A5B6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TCRBV3S1A0A5B6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.06■□□□□ 0.16
TCRBV3S1A0A5B6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 HLA-F-220ENST00000434407 884 ntBASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 GCSHP2-201ENST00000560971 527 ntBASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 FAM87A-204ENST00000613235 858 ntBASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 AL596087.1-201ENST00000400979 1969 ntBASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV3S1A0A5B6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 AL353692.3-201ENST00000407031 1396 ntBASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms