Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 STK25P1-201ENST00000585406 838 ntBASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-7A0A0A0MS04 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 EGFEM1P-202ENST00000431685 1563 ntBASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 FAM220CP-201ENST00000395253 831 ntBASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 AL645929.1-201ENST00000420084 975 ntBASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 TSPY22P-201ENST00000427496 604 ntBASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 AC005336.2-201ENST00000593183 939 ntBASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 AL592071.1-201ENST00000611956 408 ntBASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.36□□□□□ -0.11
TRBV6-7A0A0A0MS04 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms