Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 MYCLP1-201ENST00000372451 1075 ntBASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 AP000523.1-201ENST00000398242 1049 ntBASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 AC096633.1-201ENST00000422446 749 ntBASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 KRT18P48-201ENST00000434763 852 ntBASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 AC034232.1-201ENST00000506026 1064 ntBASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV18A0A075B6X5 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.77□□□□□ -0.04
TRAV18A0A075B6X5 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.77□□□□□ -0.04
TRAV18A0A075B6X5 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms