Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLIC4Q9Y696 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLIC4Q9Y696 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLIC4Q9Y696 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLIC4Q9Y696 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CLIC4Q9Y696 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
CLIC4Q9Y696 FOSL1P1-201ENST00000511041 816 ntBASIC19.58■□□□□ 0.72
CLIC4Q9Y696 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLIC4Q9Y696 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.72
CLIC4Q9Y696 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLIC4Q9Y696 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.58■□□□□ 0.72
CLIC4Q9Y696 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLIC4Q9Y696 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.58■□□□□ 0.72
CLIC4Q9Y696 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLIC4Q9Y696 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLIC4Q9Y696 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLIC4Q9Y696 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLIC4Q9Y696 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 KRT16P4-201ENST00000453883 522 ntBASIC19.57■□□□□ 0.72
CLIC4Q9Y696 BX005266.1-201ENST00000473402 457 ntBASIC19.57■□□□□ 0.72
CLIC4Q9Y696 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 AL732292.2-201ENST00000609649 430 ntBASIC19.57■□□□□ 0.72
CLIC4Q9Y696 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.57■□□□□ 0.72
CLIC4Q9Y696 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.56■□□□□ 0.72
CLIC4Q9Y696 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC4Q9Y696 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLIC4Q9Y696 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLIC4Q9Y696 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLIC4Q9Y696 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLIC4Q9Y696 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLIC4Q9Y696 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.55■□□□□ 0.72
CLIC4Q9Y696 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLIC4Q9Y696 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLIC4Q9Y696 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
CLIC4Q9Y696 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLIC4Q9Y696 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLIC4Q9Y696 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLIC4Q9Y696 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CLIC4Q9Y696 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.55■□□□□ 0.72
CLIC4Q9Y696 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.55■□□□□ 0.72
CLIC4Q9Y696 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms