Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 AL627223.1-201ENST00000416693 442 ntBASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 AL592309.1-201ENST00000443127 649 ntBASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 AC087641.1-201ENST00000557561 1021 ntBASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 AC243562.1-201ENST00000560672 389 ntBASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 NEFHP1-201ENST00000412845 2629 ntBASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 FRMD8P1-201ENST00000440433 1524 ntBASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
HS3ST3A1Q9Y663 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 HTR7P1-202ENST00000624664 4411 ntBASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 PMS2P4-201ENST00000412466 1052 ntBASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 AC005237.2-201ENST00000434368 219 ntBASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 AC079140.1-201ENST00000508039 487 ntBASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 DUX4L17-201ENST00000557360 1267 ntBASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 MIR3909-201ENST00000579518 119 ntBASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 LINC00628-201ENST00000628516 1289 ntBASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 RNF165-205ENST00000588679 2904 ntBASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HS3ST3A1Q9Y663 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HS3ST3A1Q9Y663 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HS3ST3A1Q9Y663 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HS3ST3A1Q9Y663 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HS3ST3A1Q9Y663 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
HS3ST3A1Q9Y663 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HS3ST3A1Q9Y663 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HS3ST3A1Q9Y663 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HS3ST3A1Q9Y663 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.68■□□□□ 0.26
HS3ST3A1Q9Y663 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HS3ST3A1Q9Y663 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HS3ST3A1Q9Y663 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HS3ST3A1Q9Y663 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.68■□□□□ 0.26
HS3ST3A1Q9Y663 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HS3ST3A1Q9Y663 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.68■□□□□ 0.26
HS3ST3A1Q9Y663 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HS3ST3A1Q9Y663 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HS3ST3A1Q9Y663 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.68■□□□□ 0.26
HS3ST3A1Q9Y663 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.68■□□□□ 0.26
HS3ST3A1Q9Y663 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.68■□□□□ 0.26
HS3ST3A1Q9Y663 AC093520.2-201ENST00000561830 333 ntBASIC16.68■□□□□ 0.26
HS3ST3A1Q9Y663 AL135744.1-201ENST00000565098 629 ntBASIC16.68■□□□□ 0.26
HS3ST3A1Q9Y663 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.68■□□□□ 0.26
HS3ST3A1Q9Y663 MPDU1-223ENST00000582151 728 ntBASIC16.68■□□□□ 0.26
HS3ST3A1Q9Y663 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms