Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAPPC1Q9Y5R8 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
TRAPPC1Q9Y5R8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.02□□□□□ -0.32
TRAPPC1Q9Y5R8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRAPPC1Q9Y5R8 AC093525.9-201ENST00000624961 1746 ntBASIC13.02□□□□□ -0.32
TRAPPC1Q9Y5R8 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.02□□□□□ -0.32
TRAPPC1Q9Y5R8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.02□□□□□ -0.32
TRAPPC1Q9Y5R8 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAPPC1Q9Y5R8 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 AL512625.2-201ENST00000417533 625 ntBASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 DDX43P3-201ENST00000441064 443 ntBASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 AL031432.3-201ENST00000607698 485 ntBASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 CYP51A1P1-201ENST00000492267 1507 ntBASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 AC104581.4-201ENST00000623126 3052 ntBASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 SNX18-202ENST00000343017 3140 ntBASIC13.02□□□□□ -0.33
TRAPPC1Q9Y5R8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 KRT18P61-201ENST00000585825 1298 ntBASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 ALOX12P2-203ENST00000570921 1945 ntBASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 AC013268.4-201ENST00000637413 2228 ntBASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TRAPPC1Q9Y5R8 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TRAPPC1Q9Y5R8 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAPPC1Q9Y5R8 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms