Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 AC098831.1-202ENST00000438821 336 ntBASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 AC136632.2-201ENST00000512891 861 ntBASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 MIR1199-201ENST00000621445 119 ntBASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAI2Q9Y5P3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 PTCHD3P3-201ENST00000403073 906 ntBASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 UPF3AP3-201ENST00000420996 769 ntBASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 AC092910.1-201ENST00000482027 1129 ntBASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 AC010327.4-202ENST00000591484 748 ntBASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 AL356488.2-201ENST00000602755 427 ntBASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 AC116407.3-201ENST00000623905 1129 ntBASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAI2Q9Y5P3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAI2Q9Y5P3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
RAI2Q9Y5P3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAI2Q9Y5P3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAI2Q9Y5P3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
RAI2Q9Y5P3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.33■□□□□ 0.37
RAI2Q9Y5P3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAI2Q9Y5P3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAI2Q9Y5P3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RAI2Q9Y5P3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.33■□□□□ 0.37
RAI2Q9Y5P3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
RAI2Q9Y5P3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
RAI2Q9Y5P3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
RAI2Q9Y5P3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RAI2Q9Y5P3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RAI2Q9Y5P3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RAI2Q9Y5P3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAI2Q9Y5P3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAI2Q9Y5P3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAI2Q9Y5P3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAI2Q9Y5P3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms