Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 RNA5SP415-201ENST00000517246 115 ntBASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 UNC93B6-202ENST00000528242 690 ntBASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 BX640515.1-201ENST00000617215 977 ntBASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 RPL13AP23-201ENST00000480739 586 ntBASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 SLC25A1P1-201ENST00000528351 927 ntBASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 AC008667.4-201ENST00000607370 168 ntBASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGC4Q9Y5F7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 IGHV3-65-201ENST00000523210 341 ntBASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 TERC-201ENST00000602385 541 ntBASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PCDHGC4Q9Y5F7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms