Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 MTCL1P1-201ENST00000446207 792 ntBASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 IGHV3-41-201ENST00000613121 348 ntBASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 WDR6-223ENST00000627177 207 ntTSL 2 BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 AC023824.1-201ENST00000562945 2975 ntBASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 BX276092.5-203ENST00000456199 560 ntBASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 AC068472.1-201ENST00000474589 881 ntBASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 DBP-204ENST00000599385 709 ntTSL 3 BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 AC060834.1-201ENST00000443027 2032 ntBASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.6□□□□□ -0.39
HHLA3Q9XRX5 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 FAM86EP-206ENST00000510506 987 ntBASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 KRT8P26-201ENST00000534154 1276 ntBASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms