Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.58■■□□□ 1.05
CCNL1Q9UK58 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC21.58■■□□□ 1.05
CCNL1Q9UK58 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.58■■□□□ 1.05
CCNL1Q9UK58 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC21.58■■□□□ 1.05
CCNL1Q9UK58 AL353779.1-201ENST00000434793 351 ntBASIC21.58■■□□□ 1.05
CCNL1Q9UK58 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC21.58■■□□□ 1.05
CCNL1Q9UK58 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC21.58■■□□□ 1.05
CCNL1Q9UK58 IGHV3-72-202ENST00000621503 303 ntBASIC21.58■■□□□ 1.05
CCNL1Q9UK58 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC21.58■■□□□ 1.05
CCNL1Q9UK58 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCNL1Q9UK58 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.58■■□□□ 1.04
CCNL1Q9UK58 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.58■■□□□ 1.04
CCNL1Q9UK58 TOP3BP1-201ENST00000420768 1380 ntBASIC21.58■■□□□ 1.04
CCNL1Q9UK58 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
CCNL1Q9UK58 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCNL1Q9UK58 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.58■■□□□ 1.04
CCNL1Q9UK58 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
CCNL1Q9UK58 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
CCNL1Q9UK58 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCNL1Q9UK58 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.57■■□□□ 1.04
CCNL1Q9UK58 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 AC098614.1-201ENST00000368528 745 ntBASIC21.57■■□□□ 1.04
CCNL1Q9UK58 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 RAB34-223ENST00000636154 730 ntTSL 2 BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCNL1Q9UK58 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 ARL16-202ENST00000570561 768 ntTSL 2 BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 AL844908.2-201ENST00000609461 460 ntBASIC21.56■■□□□ 1.04
CCNL1Q9UK58 TEX28P1-201ENST00000613479 1221 ntBASIC21.56■■□□□ 1.04
CCNL1Q9UK58 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 TEX28P2-201ENST00000617764 1221 ntBASIC21.56■■□□□ 1.04
CCNL1Q9UK58 AP001350.2-201ENST00000625104 1094 ntBASIC21.56■■□□□ 1.04
CCNL1Q9UK58 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 HARS-204ENST00000438307 1789 ntTSL 2 BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CCNL1Q9UK58 AC087499.5-201ENST00000452760 1342 ntBASIC21.55■■□□□ 1.04
CCNL1Q9UK58 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms