Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.83■□□□□ 0.93
HMG20BQ9P0W2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HMG20BQ9P0W2 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.83■□□□□ 0.93
HMG20BQ9P0W2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
HMG20BQ9P0W2 LTB4R2-202ENST00000528054 3092 ntBASIC20.83■□□□□ 0.93
HMG20BQ9P0W2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMG20BQ9P0W2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMG20BQ9P0W2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HMG20BQ9P0W2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMG20BQ9P0W2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMG20BQ9P0W2 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.83■□□□□ 0.93
HMG20BQ9P0W2 UPF3AP3-201ENST00000420996 769 ntBASIC20.83■□□□□ 0.93
HMG20BQ9P0W2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.83■□□□□ 0.93
HMG20BQ9P0W2 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.83■□□□□ 0.93
HMG20BQ9P0W2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
HMG20BQ9P0W2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMG20BQ9P0W2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMG20BQ9P0W2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMG20BQ9P0W2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.83■□□□□ 0.92
HMG20BQ9P0W2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.83■□□□□ 0.92
HMG20BQ9P0W2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.83■□□□□ 0.92
HMG20BQ9P0W2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
HMG20BQ9P0W2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMG20BQ9P0W2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMG20BQ9P0W2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMG20BQ9P0W2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMG20BQ9P0W2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HMG20BQ9P0W2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMG20BQ9P0W2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMG20BQ9P0W2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 MIR1233-2-201ENST00000408138 82 ntBASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 MIR1233-1-201ENST00000408722 82 ntBASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HMG20BQ9P0W2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMG20BQ9P0W2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
HMG20BQ9P0W2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMG20BQ9P0W2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMG20BQ9P0W2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMG20BQ9P0W2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
HMG20BQ9P0W2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMG20BQ9P0W2 MCCD1P2-201ENST00000423228 335 ntBASIC20.81■□□□□ 0.92
HMG20BQ9P0W2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.81■□□□□ 0.92
HMG20BQ9P0W2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.81■□□□□ 0.92
HMG20BQ9P0W2 AC004877.2-201ENST00000623941 599 ntBASIC20.81■□□□□ 0.92
HMG20BQ9P0W2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMG20BQ9P0W2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.81■□□□□ 0.92
HMG20BQ9P0W2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.81■□□□□ 0.92
HMG20BQ9P0W2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMG20BQ9P0W2 AC002310.6-201ENST00000624451 1377 ntBASIC20.81■□□□□ 0.92
HMG20BQ9P0W2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMG20BQ9P0W2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMG20BQ9P0W2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMG20BQ9P0W2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMG20BQ9P0W2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 FAM185BP-201ENST00000443595 716 ntBASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 CXCL1P1-201ENST00000502804 216 ntBASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms