Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 AC092053.1-201ENST00000605787 1936 ntBASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 CRYGEP-201ENST00000412192 528 ntBASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 PRSS29P-201ENST00000440800 595 ntBASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 KRT18P2-201ENST00000447938 1258 ntBASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 AC064836.3-201ENST00000607928 673 ntBASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 LINC02012-201ENST00000608206 1725 ntBASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SPHK1Q9NYA1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 IGLL3P-201ENST00000412472 434 ntBASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 HCG4B-203ENST00000450128 991 ntBASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 KRT18P3-201ENST00000451602 1288 ntBASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 AC010654.1-201ENST00000615722 808 ntBASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 FAM197Y3-203ENST00000618346 717 ntBASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.49■□□□□ 0.23
SPHK1Q9NYA1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPHK1Q9NYA1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPHK1Q9NYA1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SPHK1Q9NYA1 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPHK1Q9NYA1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SPHK1Q9NYA1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.48■□□□□ 0.23
SPHK1Q9NYA1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPHK1Q9NYA1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
SPHK1Q9NYA1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SPHK1Q9NYA1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SPHK1Q9NYA1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.48■□□□□ 0.23
SPHK1Q9NYA1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
SPHK1Q9NYA1 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.48■□□□□ 0.23
SPHK1Q9NYA1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms