Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 RN7SL606P-201ENST00000472779 293 ntBASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 AC093458.2-201ENST00000623150 629 ntBASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 KRT18P1-202ENST00000452408 1331 ntBASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 DRAXINP1-201ENST00000437611 948 ntBASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 IGHV3-52-201ENST00000519770 353 ntBASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 AC011840.4-201ENST00000578471 627 ntBASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 AC124864.1-201ENST00000623408 392 ntBASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LIN7CQ9NUP9 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms