Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.08■□□□□ 0.33
TREX1Q9NSU2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
TREX1Q9NSU2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TREX1Q9NSU2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TREX1Q9NSU2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
TREX1Q9NSU2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TREX1Q9NSU2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 AP002490.2-201ENST00000524791 560 ntBASIC17.07■□□□□ 0.32
TREX1Q9NSU2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 AC139887.3-201ENST00000568585 713 ntBASIC17.07■□□□□ 0.32
TREX1Q9NSU2 AC025062.2-201ENST00000605477 670 ntBASIC17.07■□□□□ 0.32
TREX1Q9NSU2 AC004706.3-202ENST00000621574 984 ntBASIC17.07■□□□□ 0.32
TREX1Q9NSU2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TREX1Q9NSU2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 AC092171.3-201ENST00000610122 2651 ntBASIC17.06■□□□□ 0.32
TREX1Q9NSU2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 SCARNA2-201ENST00000458748 420 ntBASIC17.06■□□□□ 0.32
TREX1Q9NSU2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.06■□□□□ 0.32
TREX1Q9NSU2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms