Protein–RNA interactions for Protein: Q9NPB8

GPCPD1, Glycerophosphocholine phosphodiesterase GPCPD1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1Q9NPB8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GPCPD1Q9NPB8 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.83■□□□□ 0.77
GPCPD1Q9NPB8 DNAJB3-201ENST00000446806 729 ntBASIC19.83■□□□□ 0.77
GPCPD1Q9NPB8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.83■□□□□ 0.77
GPCPD1Q9NPB8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.83■□□□□ 0.77
GPCPD1Q9NPB8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.83■□□□□ 0.77
GPCPD1Q9NPB8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.83■□□□□ 0.77
GPCPD1Q9NPB8 MIR3687-2-201ENST00000577708 61 ntBASIC19.83■□□□□ 0.77
GPCPD1Q9NPB8 MTDHP5-201ENST00000598980 586 ntBASIC19.83■□□□□ 0.77
GPCPD1Q9NPB8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.83■□□□□ 0.77
GPCPD1Q9NPB8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.83■□□□□ 0.77
GPCPD1Q9NPB8 MIR3687-1-201ENST00000614492 61 ntBASIC19.83■□□□□ 0.77
GPCPD1Q9NPB8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GPCPD1Q9NPB8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
GPCPD1Q9NPB8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GPCPD1Q9NPB8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
GPCPD1Q9NPB8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.83■□□□□ 0.76
GPCPD1Q9NPB8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.83■□□□□ 0.76
GPCPD1Q9NPB8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GPCPD1Q9NPB8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 MCCD1P2-201ENST00000423228 335 ntBASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 AL513480.1-201ENST00000451731 511 ntBASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 AC005332.8-201ENST00000622750 2735 ntBASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GPCPD1Q9NPB8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 AC141586.5-201ENST00000624546 2050 ntBASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 ALG1L5P-201ENST00000482043 771 ntBASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 AC107918.2-201ENST00000530817 355 ntBASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 AC023141.13-201ENST00000604991 943 ntBASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 AC106820.2-201ENST00000563775 3264 ntBASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
GPCPD1Q9NPB8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GPCPD1Q9NPB8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.8■□□□□ 0.76
GPCPD1Q9NPB8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GPCPD1Q9NPB8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GPCPD1Q9NPB8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms