Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SH2D4AQ9H788 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SH2D4AQ9H788 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SH2D4AQ9H788 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SH2D4AQ9H788 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SH2D4AQ9H788 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SH2D4AQ9H788 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SH2D4AQ9H788 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SH2D4AQ9H788 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SH2D4AQ9H788 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SH2D4AQ9H788 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SH2D4AQ9H788 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SH2D4AQ9H788 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.94■□□□□ 0.78
SH2D4AQ9H788 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 AC107918.2-201ENST00000530817 355 ntBASIC19.94■□□□□ 0.78
SH2D4AQ9H788 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 REXO1L3P-201ENST00000622202 1288 ntBASIC19.94■□□□□ 0.78
SH2D4AQ9H788 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 AC092902.6-201ENST00000641783 218 ntBASIC19.94■□□□□ 0.78
SH2D4AQ9H788 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SH2D4AQ9H788 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
SH2D4AQ9H788 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
SH2D4AQ9H788 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.93■□□□□ 0.78
SH2D4AQ9H788 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SH2D4AQ9H788 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.93■□□□□ 0.78
SH2D4AQ9H788 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH2D4AQ9H788 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH2D4AQ9H788 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
SH2D4AQ9H788 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SH2D4AQ9H788 AC002056.1-201ENST00000395613 760 ntBASIC19.93■□□□□ 0.78
SH2D4AQ9H788 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.93■□□□□ 0.78
SH2D4AQ9H788 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SH2D4AQ9H788 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.93■□□□□ 0.78
SH2D4AQ9H788 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.93■□□□□ 0.78
SH2D4AQ9H788 AP002472.1-201ENST00000577490 586 ntBASIC19.93■□□□□ 0.78
SH2D4AQ9H788 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.93■□□□□ 0.78
SH2D4AQ9H788 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH2D4AQ9H788 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.93■□□□□ 0.78
SH2D4AQ9H788 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH2D4AQ9H788 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH2D4AQ9H788 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH2D4AQ9H788 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH2D4AQ9H788 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH2D4AQ9H788 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH2D4AQ9H788 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 AC027796.2-201ENST00000575326 344 ntBASIC19.92■□□□□ 0.78
SH2D4AQ9H788 AC005412.3-201ENST00000580309 715 ntBASIC19.92■□□□□ 0.78
SH2D4AQ9H788 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.92■□□□□ 0.78
SH2D4AQ9H788 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms