Protein–RNA interactions for Protein: Q9C0K7

STRADB, STE20-related kinase adapter protein beta, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBQ9C0K7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
STRADBQ9C0K7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
STRADBQ9C0K7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
STRADBQ9C0K7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
STRADBQ9C0K7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.22■□□□□ 0.19
STRADBQ9C0K7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 DUX4L27-201ENST00000554796 1261 ntBASIC16.22■□□□□ 0.19
STRADBQ9C0K7 KRT8P23-201ENST00000560090 1207 ntBASIC16.22■□□□□ 0.19
STRADBQ9C0K7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
STRADBQ9C0K7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 TUBB3P1-201ENST00000405796 1332 ntBASIC16.21■□□□□ 0.19
STRADBQ9C0K7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 HMGA1P7-201ENST00000406908 502 ntBASIC16.21■□□□□ 0.19
STRADBQ9C0K7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.21■□□□□ 0.19
STRADBQ9C0K7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
STRADBQ9C0K7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
STRADBQ9C0K7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
STRADBQ9C0K7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
STRADBQ9C0K7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
STRADBQ9C0K7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
STRADBQ9C0K7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
STRADBQ9C0K7 UXT-AS1-201ENST00000590504 1525 ntBASIC16.2■□□□□ 0.18
STRADBQ9C0K7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
STRADBQ9C0K7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
STRADBQ9C0K7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
STRADBQ9C0K7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.2■□□□□ 0.18
STRADBQ9C0K7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms