Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM3Q9BZL3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.09□□□□□ -0.15
SMIM3Q9BZL3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM3Q9BZL3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM3Q9BZL3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SMIM3Q9BZL3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM3Q9BZL3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.09□□□□□ -0.15
SMIM3Q9BZL3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SMIM3Q9BZL3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SMIM3Q9BZL3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.15
SMIM3Q9BZL3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SMIM3Q9BZL3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SMIM3Q9BZL3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SMIM3Q9BZL3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 NCF1B-203ENST00000435988 1254 ntBASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 AP003097.1-201ENST00000530657 1135 ntBASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 KRT8P47-201ENST00000604727 1398 ntBASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.08□□□□□ -0.16
SMIM3Q9BZL3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 AC112497.1-201ENST00000624824 639 ntBASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 AC133041.1-202ENST00000642053 222 ntBASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM3Q9BZL3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM3Q9BZL3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM3Q9BZL3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM3Q9BZL3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM3Q9BZL3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM3Q9BZL3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms