Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 AC144831.1-201ENST00000573312 2656 ntBASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SSBP4Q9BWG4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
SSBP4Q9BWG4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
SSBP4Q9BWG4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SSBP4Q9BWG4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SSBP4Q9BWG4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SSBP4Q9BWG4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SSBP4Q9BWG4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.02□□□□□ -0.32
SSBP4Q9BWG4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SSBP4Q9BWG4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 ID1-201ENST00000376105 1233 ntBASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 BX088651.1-201ENST00000540551 451 ntBASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP4Q9BWG4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 LYSMD4-203ENST00000378904 2122 ntBASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 AP001412.1-201ENST00000608405 714 ntBASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 FAM197Y4-202ENST00000622692 608 ntBASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.01□□□□□ -0.33
SSBP4Q9BWG4 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP4Q9BWG4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSBP4Q9BWG4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSBP4Q9BWG4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13□□□□□ -0.33
SSBP4Q9BWG4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP4Q9BWG4 AC092053.1-201ENST00000605787 1936 ntBASIC13□□□□□ -0.33
SSBP4Q9BWG4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP4Q9BWG4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms