Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EYA3Q99504 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EYA3Q99504 WRB-204ENST00000398753 699 ntTSL 3 BASIC20.72■□□□□ 0.91
EYA3Q99504 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC20.72■□□□□ 0.91
EYA3Q99504 AC244107.1-201ENST00000442033 332 ntBASIC20.72■□□□□ 0.91
EYA3Q99504 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EYA3Q99504 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.72■□□□□ 0.91
EYA3Q99504 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.72■□□□□ 0.91
EYA3Q99504 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EYA3Q99504 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
EYA3Q99504 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
EYA3Q99504 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
EYA3Q99504 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.71■□□□□ 0.91
EYA3Q99504 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EYA3Q99504 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EYA3Q99504 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EYA3Q99504 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EYA3Q99504 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
EYA3Q99504 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EYA3Q99504 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
EYA3Q99504 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EYA3Q99504 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EYA3Q99504 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EYA3Q99504 TERF1P3-201ENST00000505638 1227 ntBASIC20.71■□□□□ 0.91
EYA3Q99504 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
EYA3Q99504 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC20.71■□□□□ 0.91
EYA3Q99504 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.71■□□□□ 0.91
EYA3Q99504 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.71■□□□□ 0.91
EYA3Q99504 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
EYA3Q99504 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.71■□□□□ 0.91
EYA3Q99504 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
EYA3Q99504 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
EYA3Q99504 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EYA3Q99504 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
EYA3Q99504 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
EYA3Q99504 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC20.71■□□□□ 0.91
EYA3Q99504 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EYA3Q99504 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.7■□□□□ 0.91
EYA3Q99504 WASH6P-202ENST00000359512 1437 ntBASIC20.7■□□□□ 0.9
EYA3Q99504 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.7■□□□□ 0.9
EYA3Q99504 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
EYA3Q99504 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
EYA3Q99504 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EYA3Q99504 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EYA3Q99504 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EYA3Q99504 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EYA3Q99504 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.7■□□□□ 0.9
EYA3Q99504 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EYA3Q99504 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EYA3Q99504 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.7■□□□□ 0.9
EYA3Q99504 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EYA3Q99504 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.7■□□□□ 0.9
EYA3Q99504 SPDYE14P-201ENST00000442619 822 ntBASIC20.7■□□□□ 0.9
EYA3Q99504 TSPY16P-201ENST00000449843 468 ntBASIC20.7■□□□□ 0.9
EYA3Q99504 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20.7■□□□□ 0.9
EYA3Q99504 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
EYA3Q99504 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EYA3Q99504 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.7■□□□□ 0.9
EYA3Q99504 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
EYA3Q99504 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EYA3Q99504 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EYA3Q99504 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
EYA3Q99504 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EYA3Q99504 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.7■□□□□ 0.9
EYA3Q99504 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
EYA3Q99504 FO538757.1-201ENST00000623083 1397 ntBASIC20.7■□□□□ 0.9
EYA3Q99504 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EYA3Q99504 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EYA3Q99504 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
EYA3Q99504 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EYA3Q99504 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EYA3Q99504 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.69■□□□□ 0.9
EYA3Q99504 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.69■□□□□ 0.9
EYA3Q99504 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.69■□□□□ 0.9
EYA3Q99504 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EYA3Q99504 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
EYA3Q99504 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.69■□□□□ 0.9
EYA3Q99504 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EYA3Q99504 AC008677.1-201ENST00000519230 1561 ntBASIC20.69■□□□□ 0.9
EYA3Q99504 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC20.69■□□□□ 0.9
EYA3Q99504 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EYA3Q99504 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
EYA3Q99504 AC236430.1-201ENST00000402231 743 ntBASIC20.69■□□□□ 0.9
EYA3Q99504 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC20.69■□□□□ 0.9
EYA3Q99504 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC20.69■□□□□ 0.9
EYA3Q99504 AC002472.2-201ENST00000442739 958 ntBASIC20.69■□□□□ 0.9
EYA3Q99504 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
EYA3Q99504 OARD1-208ENST00000469104 704 ntTSL 2 BASIC20.69■□□□□ 0.9
EYA3Q99504 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC20.69■□□□□ 0.9
EYA3Q99504 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.69■□□□□ 0.9
EYA3Q99504 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.69■□□□□ 0.9
EYA3Q99504 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20.69■□□□□ 0.9
EYA3Q99504 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EYA3Q99504 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC20.69■□□□□ 0.9
EYA3Q99504 AF228730.6-201ENST00000641497 218 ntBASIC20.69■□□□□ 0.9
EYA3Q99504 AC084121.3-201ENST00000641716 218 ntBASIC20.69■□□□□ 0.9
EYA3Q99504 AC105233.6-201ENST00000642093 218 ntBASIC20.69■□□□□ 0.9
EYA3Q99504 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EYA3Q99504 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.69■□□□□ 0.9
EYA3Q99504 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms