Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40CQ96S21 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40CQ96S21 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40CQ96S21 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40CQ96S21 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
RAB40CQ96S21 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.96□□□□□ -0.18
RAB40CQ96S21 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
RAB40CQ96S21 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAB40CQ96S21 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAB40CQ96S21 EGFEM1P-202ENST00000431685 1563 ntBASIC13.96□□□□□ -0.18
RAB40CQ96S21 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RAB40CQ96S21 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAB40CQ96S21 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.18
RAB40CQ96S21 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.96□□□□□ -0.18
RAB40CQ96S21 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40CQ96S21 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40CQ96S21 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.95□□□□□ -0.18
RAB40CQ96S21 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40CQ96S21 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
RAB40CQ96S21 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40CQ96S21 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40CQ96S21 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
RAB40CQ96S21 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40CQ96S21 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40CQ96S21 AC079328.2-201ENST00000561241 3354 ntBASIC13.95□□□□□ -0.18
RAB40CQ96S21 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB40CQ96S21 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40CQ96S21 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB40CQ96S21 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB40CQ96S21 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40CQ96S21 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.95□□□□□ -0.18
RAB40CQ96S21 AC034232.1-201ENST00000506026 1064 ntBASIC13.95□□□□□ -0.18
RAB40CQ96S21 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB40CQ96S21 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40CQ96S21 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB40CQ96S21 EGLN1P1-201ENST00000531623 762 ntBASIC13.95□□□□□ -0.18
RAB40CQ96S21 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40CQ96S21 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40CQ96S21 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.95□□□□□ -0.18
RAB40CQ96S21 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.95□□□□□ -0.18
RAB40CQ96S21 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.95□□□□□ -0.18
RAB40CQ96S21 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
RAB40CQ96S21 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
RAB40CQ96S21 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB40CQ96S21 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.95□□□□□ -0.18
RAB40CQ96S21 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40CQ96S21 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40CQ96S21 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
RAB40CQ96S21 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40CQ96S21 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40CQ96S21 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB40CQ96S21 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40CQ96S21 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40CQ96S21 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40CQ96S21 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
RAB40CQ96S21 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RAB40CQ96S21 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40CQ96S21 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC13.94□□□□□ -0.18
RAB40CQ96S21 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40CQ96S21 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40CQ96S21 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
RAB40CQ96S21 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40CQ96S21 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40CQ96S21 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40CQ96S21 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40CQ96S21 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40CQ96S21 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
RAB40CQ96S21 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RAB40CQ96S21 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40CQ96S21 COX5BP2-201ENST00000392354 334 ntBASIC13.94□□□□□ -0.18
RAB40CQ96S21 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC13.94□□□□□ -0.18
RAB40CQ96S21 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40CQ96S21 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB40CQ96S21 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB40CQ96S21 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40CQ96S21 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.94□□□□□ -0.18
RAB40CQ96S21 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.94□□□□□ -0.18
RAB40CQ96S21 AC004263.2-201ENST00000617183 678 ntBASIC13.94□□□□□ -0.18
RAB40CQ96S21 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB40CQ96S21 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40CQ96S21 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
RAB40CQ96S21 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB40CQ96S21 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB40CQ96S21 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40CQ96S21 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB40CQ96S21 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40CQ96S21 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.94□□□□□ -0.18
RAB40CQ96S21 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40CQ96S21 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40CQ96S21 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40CQ96S21 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
RAB40CQ96S21 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40CQ96S21 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40CQ96S21 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
RAB40CQ96S21 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
RAB40CQ96S21 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.93□□□□□ -0.18
RAB40CQ96S21 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB40CQ96S21 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40CQ96S21 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
RAB40CQ96S21 AL662844.4-201ENST00000606367 2838 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms